C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 239
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196793 ZNF239 9606 - 10:43556344-43574618 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306006 ZNF239-001 43556344-43568459 protein_coding
  ENST00000374446 ZNF239-002 43556344-43574584 protein_coding
  ENST00000426961 ZNF239-201 43556347-43574618 protein_coding
  ENST00000491188 ZNF239-003 43557529-43574597 processed_transcript
  ENST00000535642 ZNF239-202 43556347-43574618 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306006ENST00000374446ENST00000426961ENST00000491188ENST00000535642
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306006 0.085±0.00 0.266±0.00 0.082±0.00 0.122±0.00 0.497±0.31 N/A 0.109±0.03 0.287±0.00 N/A N/A N/A 0.247±0.20 0.056±0.00 0.434±0.00
ENST00000374446 N/A N/A N/A N/A N/A N/A N/A 1.261±0.00 N/A N/A N/A 1.086±0.00 0.385±0.00 N/A
ENST00000426961 N/A 0.638±0.00 N/A 0.229±0.00 N/A 0.337±0.00 0.133±0.00 N/A 0.304±0.00 N/A N/A N/A N/A 0.571±0.06
ENST00000491188 N/A N/A 0.082±0.00 0.608±0.27 0.787±0.00 1.166±0.00 0.427±0.30 0.136±0.00 N/A 0.218±0.02 N/A N/A 0.244±0.00 1.151±0.00
ENST00000535642 0.365±0.00 1.216±0.00 0.119±0.00 0.503±0.03 0.497±0.09 0.516±0.00 N/A N/A 0.941±0.00 0.043±0.00 0.505±0.34 1.195±0.93 0.371±0.00 1.801±1.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0003723 TAS RNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075457 si:dkey-3p4.8 si:dkey-3p4.8 protein_coding Danio_rerio
ENSDARG00000075796 BX927193.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000078808 zgc:173619 zgc:173619 protein_coding Danio_rerio
ENSDARG00000086296 si:ch211-209p16.1 si:ch211-209p16.1 protein_coding Danio_rerio
ENSDARG00000086364 CABZ01070852.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087791 BX276122.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087917 BX649341.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088847 CR388052.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088961 zgc:173620 zgc:173620 protein_coding Danio_rerio
ENSDARG00000090539 si:dkey-28i19.1 si:dkey-28i19.1 protein_coding Danio_rerio
ENSDARG00000090798 BX548067.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091276 si:dkey-146c18.5 si:dkey-146c18.5 protein_coding Danio_rerio
ENSDARG00000092017 BX537137.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092190 BX842593.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092293 si:ch211-209j12.3 si:ch211-209j12.3 protein_coding Danio_rerio
ENSDARG00000092329 si:dkey-156j15.1 si:dkey-156j15.1 protein_coding Danio_rerio
ENSDARG00000092596 si:dkey-285e18.6 si:dkey-285e18.6 protein_coding Danio_rerio
ENSDARG00000092849 si:ch73-92e7.4 si:ch73-92e7.4 protein_coding Danio_rerio
ENSDARG00000093617 BX950868.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093944 BX321871.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093949 CABZ01028403.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094177 si:ch211-208f21.2 si:ch211-208f21.2 protein_coding Danio_rerio
ENSDARG00000094203 BX901892.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095023 BX324003.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095582 CR759907.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096000 si:dkey-29j8.2 si:dkey-29j8.2 protein_coding Danio_rerio
ENSDARG00000096143 si:ch211-223a21.3 si:ch211-223a21.3 protein_coding Danio_rerio
ENSDARG00000096213 si:dkey-92j16.2 si:dkey-92j16.2 protein_coding Danio_rerio
ENSDARG00000096216 si:ch211-162i8.7 si:ch211-162i8.7 protein_coding Danio_rerio
ENSDARG00000097091 zgc:173619 zgc:173619 protein_coding Danio_rerio

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