C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hydroxycarboxylic acid receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196917 HCAR1 9606 - 12:122726076-122730843 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000432564 HCAR1-001 122726076-122730843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000432564
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000432564 1.801±0.00 0.874±0.00 0.090±0.05 3.836±3.32 0.305±0.23 0.090±0.01 1.053±0.00 0.126±0.07 0.176±0.09 0.119±0.01 0.456±0.30 1.591±0.65 0.620±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006Q CIL_00006Q_0003 CGP 12:122714756-122730843
CIL_0002PG CIL_0002PG_0001 CGP 12:122726076-122771064

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 TAS plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0032355 IDA response to estradiol

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079958 hcar1-2 hydroxycarboxylic acid receptor 1-2 protein_coding Danio_rerio
ENSDARG00000086066 hcar1-1 hydroxycarboxylic acid receptor 1-1 protein_coding Danio_rerio
ENSMUSG00000049241 Hcar1 hydrocarboxylic acid receptor 1 protein_coding Mus_musculus

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