C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialic acid binding Ig-like lectin 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197046 SIGLEC15 9606 + 18:45825512-45844080 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389474 SIGLEC15-001 45825512-45842556 protein_coding
  ENST00000546268 SIGLEC15-002 45829091-45842224 protein_coding
  ENST00000587418 SIGLEC15-004 45837841-45841094 protein_coding
  ENST00000593178 SIGLEC15-003 45838522-45844080 retained_intron
  ENST00000602118 SIGLEC15-006 45829088-45842556 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000546268ENST00000587418ENST00000593178
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000546268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.520±0.00 0.261±0.09 0.116±0.00
ENST00000587418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.00
ENST00000593178 0.702±0.00 0.558±0.00 0.264±0.00 0.368±0.00 0.349±0.21 0.341±0.00 0.209±0.00 0.168±0.00 0.228±0.05 0.350±0.00 0.027±0.00 0.052±0.00 0.082±0.05 0.350±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VD CIL_0007VD_0001 VISTA 18:45253091-45855264
CIL_00093J CIL_00093J_0001 VISTA 18:45288382-45890764

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032956 IEA regulation of actin cytoskeleton organization
GO:0043234 IEA protein complex
GO:0045087 TAS innate immune response
GO:0045124 IEA regulation of bone resorption
GO:0071402 IEA cellular response to lipoprotein particle stimulus
GO:2001204 IEA regulation of osteoclast development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032743 SIGLEC15 (1 of 2) sialic acid binding Ig-like lectin 15 protein_coding Danio_rerio
ENSMUSG00000091055 Siglec15 sialic acid binding Ig-like lectin 15 protein_coding Mus_musculus

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