C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen family A, 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197172 MAGEA6 9606 - X:152766136-152769747 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329342 MAGEA6-001 152766136-152769747 protein_coding
  ENST00000412733 MAGEA6-002 152767047-152769716 protein_coding
  ENST00000457643 MAGEA6-003 152766944-152769677 protein_coding
  ENST00000616035 MAGEA6-201 152766147-152769716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000329342ENST00000412733ENST00000616035
Transcript ID Placenta Testis
ENST00000329342 0.032±0.00 1.935±1.49
ENST00000412733 0.072±0.00 N/A
ENST00000616035 0.004±0.00 2.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AT CIL_0001AT_0004 CGP X:152749863-152769747

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSMUSG00000031118 1700080O16Rik RIKEN cDNA 1700080O16 gene protein_coding Mus_musculus
ENSMUSG00000031179 3830417A13Rik RIKEN cDNA 3830417A13 gene protein_coding Mus_musculus
ENSMUSG00000033343 Magea4 melanoma antigen, family A, 4 protein_coding Mus_musculus
ENSMUSG00000043453 Magea10 melanoma antigen family A, 10 protein_coding Mus_musculus
ENSMUSG00000055746 Magea2 melanoma antigen, family A, 2 protein_coding Mus_musculus
ENSMUSG00000063728 Magea6 melanoma antigen, family A, 6 protein_coding Mus_musculus
ENSMUSG00000079349 Magea5 melanoma antigen, family A, 5 protein_coding Mus_musculus
ENSMUSG00000079350 Magea8 melanoma antigen, family A, 8 protein_coding Mus_musculus
ENSMUSG00000094196 Magea3 melanoma antigen, family A, 3 protein_coding Mus_musculus
ENSMUSG00000096644 Magea1 melanoma antigen, family A, 1 protein_coding Mus_musculus

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