C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: low density lipoprotein receptor-related protein 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197324 LRP10 9606 + 14:22871613-22881580 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359591 LRP10-001 22871613-22881580 protein_coding
  ENST00000470660 LRP10-002 22876717-22878083 processed_transcript
  ENST00000546834 LRP10-004 22872304-22879310 protein_coding
  ENST00000551466 LRP10-003 22875136-22880392 protein_coding
  ENST00000553002 LRP10-005 22873085-22875866 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359591ENST00000470660ENST00000546834ENST00000551466ENST00000553002
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359591 25.704±0.00 16.305±0.00 2.876±0.00 3.467±2.73 8.098±4.72 13.339±10.90 4.834±4.37 15.617±14.73 6.365±4.30 14.197±12.25 3.891±3.66 13.221±10.51 23.051±11.20 7.829±6.16
ENST00000470660 N/A 39.688±0.00 N/A N/A 38.027±0.00 61.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546834 62.735±0.00 24.980±0.00 4.430±0.00 4.292±3.02 19.381±11.84 20.573±15.00 9.534±8.23 20.618±17.60 8.490±3.99 34.445±29.04 8.641±7.21 24.633±13.98 53.460±2.20 14.921±10.32
ENST00000551466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.701±0.00 N/A N/A 1.028±0.00
ENST00000553002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.054±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z6 CIL_0004Z6_0002 CGP 14:22836557-22881580
CIL_0006X5 CIL_0006X5_0001 CGP 14:22871613-22887686

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005905 IEA coated pit
GO:0006897 IEA endocytosis
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054539 LRP10 low density lipoprotein receptor-related protein 10 protein_coding Danio_rerio
ENSMUSG00000022175 Lrp10 low-density lipoprotein receptor-related protein 10 protein_coding Mus_musculus

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