C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ventricular zone expressed PH domain-containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197415 VEPH1 9606 - 3:157259742-157533619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000362010 VEPH1-001 157259742-157503427 protein_coding
  ENST00000392832 VEPH1-005 157260909-157499554 protein_coding
  ENST00000392833 VEPH1-004 157259742-157503339 protein_coding
  ENST00000461299 VEPH1-007 157470480-157533616 protein_coding
  ENST00000468233 VEPH1-002 157459622-157503626 protein_coding
  ENST00000469007 VEPH1-016 157409669-157428427 processed_transcript
  ENST00000472419 VEPH1-018 157363293-157364481 retained_intron
  ENST00000473907 VEPH1-010 157470419-157533608 nonsense_mediated_decay
  ENST00000475050 VEPH1-009 157470452-157533615 nonsense_mediated_decay
  ENST00000479987 VEPH1-012 157428322-157533619 protein_coding
  ENST00000482434 VEPH1-013 157460095-157489356 retained_intron
  ENST00000482685 VEPH1-015 157381273-157436953 processed_transcript
  ENST00000483440 VEPH1-008 157489061-157499555 processed_transcript
  ENST00000487753 VEPH1-011 157460215-157533606 protein_coding
  ENST00000488772 VEPH1-017 157363692-157381673 processed_transcript
  ENST00000489602 VEPH1-006 157470502-157533614 protein_coding
  ENST00000490235 VEPH1-014 157459622-157470529 processed_transcript
  ENST00000494677 VEPH1-003 157459519-157503574 protein_coding
  ENST00000537559 VEPH1-201 157459621-157495506 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000362010ENST00000392832ENST00000392833ENST00000461299ENST00000479987ENST00000482685ENST00000488772
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000362010 1.544±0.00 N/A N/A N/A 2.141±0.00 N/A 3.338±0.00 0.095±0.00 0.369±0.21 0.392±0.00
ENST00000392832 1.985±0.00 N/A N/A N/A 0.020±0.00 N/A 4.998±0.00 0.144±0.00 N/A N/A
ENST00000392833 0.882±0.00 0.084±0.00 N/A 0.011±0.00 N/A 0.114±0.00 N/A 0.034±0.01 N/A N/A
ENST00000461299 N/A N/A 0.547±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479987 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.996±0.00
ENST00000482685 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.227±0.00
ENST00000488772 N/A N/A N/A N/A 0.734±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081H CIL_00081H_0001 VISTA 3:156827989-157431369
CIL_00028W CIL_00028W_0001 CGP 3:157146508-157533619
CIL_0004JX CIL_0004JX_0002 CGP 3:157259742-157533619

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005886 IEA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031095 veph ventricular zone expressed PH domain protein protein_coding Danio_rerio
ENSMUSG00000027831 Veph1 ventricular zone expressed PH domain-containing 1 protein_coding Mus_musculus

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