C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oligodendrocytic myelin paranodal and inner loop protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197430 OPALIN 9606 - 10:96343216-96359365 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371172 OPALIN-001 96343216-96359302 protein_coding
  ENST00000393870 OPALIN-201 96343222-96359365 protein_coding
  ENST00000393871 OPALIN-202 96343222-96359365 protein_coding
  ENST00000419479 OPALIN-203 96343222-96359365 protein_coding
  ENST00000536387 OPALIN-204 96343222-96357159 protein_coding
  ENST00000611913 OPALIN-205 96343222-96353455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleTestisENST00000371172ENST00000393870ENST00000611913
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Testis
ENST00000371172 12.634±5.96 N/A N/A N/A N/A N/A N/A N/A
ENST00000393870 7.141±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000611913 18.923±2.47 0.004±0.00 0.016±0.01 0.003±0.00 0.016±0.00 0.113±0.00 0.053±0.04 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DT CIL_0003DT_0001 CGP 10:96304396-96359365
CIL_0004CU CIL_0004CU_0001 CGP 10:96343216-96513918

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000050121 Opalin oligodendrocytic myelin paranodal and inner loop protein protein_coding Mus_musculus

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