C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 5 open reading frame 56
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197536 C5orf56 9606 + 5:132410636-132476044 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337752 C5orf56-001 132410981-132465109 protein_coding
  ENST00000378947 C5orf56-003 132410989-132457421 protein_coding
  ENST00000378953 C5orf56-002 132410636-132476044 protein_coding
  ENST00000407797 C5orf56-005 132410989-132470908 protein_coding
  ENST00000461203 C5orf56-004 132410981-132449991 retained_intron
  ENST00000464024 C5orf56-006 132470532-132476010 processed_transcript
  ENST00000621237 C5orf56-201 132419864-132460930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337752ENST00000378953ENST00000621237
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337752 0.235±0.00 1.024±0.00 0.414±0.00 1.550±0.56 0.157±0.00 0.447±0.00 0.633±0.35 0.113±0.00 0.673±0.00 0.189±0.03 0.535±0.18 0.163±0.04 0.369±0.09
ENST00000378953 1.825±0.00 N/A 1.873±0.00 3.486±0.00 2.968±0.00 3.470±0.00 1.933±0.00 1.321±0.00 31.060±0.00 1.656±0.00 4.535±0.00 2.717±0.23 2.113±0.00
ENST00000621237 N/A 30.796±0.00 N/A N/A 8.839±0.00 N/A 4.856±0.00 10.274±0.00 N/A 10.954±0.00 7.627±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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