C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S26
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197728 RPS26 9606 + 12:56041853-56044675 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356464 RPS26-001 56041853-56044675 protein_coding
  ENST00000548590 RPS26-002 56042140-56044223 retained_intron
  ENST00000552361 RPS26-003 56041893-56044223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356464ENST00000552361
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356464 N/A N/A 1.673±0.00 13.726±0.00 N/A 3.025±0.00 2.273±0.00 10.005±0.00 2.601±0.00 2.456±0.00 3.955±2.89 79.907±70.37 16.525±11.53 15.829±0.00
ENST00000552361 97.247±0.00 246.088±0.00 12.831±0.00 58.088±17.44 55.935±41.64 127.338±98.87 30.854±15.72 75.418±18.01 41.391±22.83 130.264±112.96 40.584±19.62 276.033±132.46 109.380±31.54 45.841±18.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003729 IDA mRNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IC:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0015935 IDA small ribosomal subunit
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0033119 IDA negative regulation of RNA splicing
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030408 rps26l ribosomal protein S26, like protein_coding Danio_rerio
ENSDARG00000037071 rps26 ribosomal protein S26 protein_coding Danio_rerio
ENSMUSG00000025362 Rps26 ribosomal protein S26 protein_coding Mus_musculus
ENSMUSG00000059775 Rps26-ps1 ribosomal protein S26, pseudogene 1 protein_coding Mus_musculus

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