C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197958 RPL12 9606 - 9:127447674-127451405 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361436 RPL12-001 127447674-127451405 protein_coding
  ENST00000483598 RPL12-004 127449110-127449700 processed_transcript
  ENST00000497322 RPL12-002 127447680-127451405 processed_transcript
  ENST00000497825 RPL12-003 127447674-127451405 processed_transcript
  ENST00000536368 RPL12-201 127447677-127451373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361436ENST00000536368
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361436 545.437±0.00 671.887±0.00 50.488±0.00 95.026±12.52 334.525±185.48 441.419±258.73 95.858±43.97 234.843±93.26 207.973±7.51 428.283±274.87 476.224±304.12 1040.719±865.49 834.944±424.22 259.594±170.30
ENST00000536368 N/A N/A N/A 69.017±0.00 N/A 171.049±0.00 N/A 204.284±0.00 N/A N/A N/A 521.990±0.00 311.520±0.00 134.522±28.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0001 VISTA 9:127227593-127829012

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 NAS:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006691 rpl12 ribosomal protein L12 protein_coding Danio_rerio
ENSMUSG00000038900 Rpl12 ribosomal protein L12 protein_coding Mus_musculus
ENSMUSG00000063328 Gm9396 predicted gene 9396 protein_coding Mus_musculus

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