C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198000 NOL8 9606 - 9:92297358-92325636 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358855 NOL8-201 92297359-92325594 protein_coding
  ENST00000360868 NOL8-003 92297614-92324660 nonsense_mediated_decay
  ENST00000411621 NOL8-020 92315982-92325385 protein_coding
  ENST00000421075 NOL8-007 92315852-92325594 protein_coding
  ENST00000432670 NOL8-004 92301817-92325358 protein_coding
  ENST00000433029 NOL8-013 92315384-92325370 protein_coding
  ENST00000434228 NOL8-005 92306950-92325343 nonsense_mediated_decay
  ENST00000442668 NOL8-006 92297358-92325556 protein_coding
  ENST00000445919 NOL8-028 92315957-92325312 nonsense_mediated_decay
  ENST00000463593 NOL8-001 92297484-92300026 retained_intron
  ENST00000467230 NOL8-011 92315689-92318947 retained_intron
  ENST00000477862 NOL8-009 92301579-92308950 processed_transcript
  ENST00000482475 NOL8-002 92322850-92325292 retained_intron
  ENST00000535387 NOL8-010 92297836-92324161 protein_coding
  ENST00000535649 NOL8-023 92323137-92325350 retained_intron
  ENST00000535807 NOL8-018 92316094-92324675 protein_coding
  ENST00000536593 NOL8-016 92297484-92325350 nonsense_mediated_decay
  ENST00000536624 NOL8-019 92318669-92325636 protein_coding
  ENST00000538215 NOL8-022 92320191-92325353 processed_transcript
  ENST00000538802 NOL8-029 92306971-92310825 retained_intron
  ENST00000542053 NOL8-008 92297836-92325333 protein_coding
  ENST00000542573 NOL8-025 92319288-92325348 nonsense_mediated_decay
  ENST00000542613 NOL8-027 92319278-92325331 protein_coding
  ENST00000543260 NOL8-026 92319320-92325336 nonsense_mediated_decay
  ENST00000543985 NOL8-024 92319988-92325350 processed_transcript
  ENST00000544321 NOL8-021 92320130-92325361 nonsense_mediated_decay
  ENST00000544867 NOL8-017 92297617-92325338 nonsense_mediated_decay
  ENST00000545444 NOL8-012 92297424-92325590 nonsense_mediated_decay
  ENST00000545558 NOL8-015 92297490-92325350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000360868ENST00000432670ENST00000442668ENST00000535387ENST00000536593ENST00000542053ENST00000544867ENST00000545444ENST00000545558
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000360868 N/A N/A N/A N/A 1.302±0.00 1.052±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000432670 N/A N/A 1.276±0.00 N/A N/A N/A N/A N/A N/A N/A 2.759±0.00 N/A N/A
ENST00000442668 N/A N/A N/A N/A N/A N/A 1.118±0.00 N/A N/A N/A 2.749±0.21 0.727±0.00 N/A
ENST00000535387 N/A N/A N/A N/A 1.620±0.00 1.373±0.00 N/A N/A 0.994±0.00 1.855±0.00 N/A N/A N/A
ENST00000536593 0.972±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.271±0.59 N/A
ENST00000542053 N/A 3.298±0.00 N/A 0.770±0.00 2.553±0.00 1.756±0.00 0.497±0.00 3.025±0.00 0.579±0.00 N/A 4.229±2.31 1.449±0.00 3.326±0.00
ENST00000544867 N/A 2.282±0.00 N/A 0.470±0.00 N/A 0.853±0.00 0.287±0.00 N/A 0.364±0.00 N/A 2.753±1.29 N/A N/A
ENST00000545444 N/A N/A N/A 1.221±0.00 N/A N/A N/A N/A 0.985±0.00 N/A 3.259±0.00 N/A N/A
ENST00000545558 1.139±0.00 2.618±0.00 N/A 1.817±0.00 N/A 1.714±0.00 1.279±0.00 N/A N/A 0.357±0.00 N/A 1.179±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019H CIL_00019H_0002 CGP 9:92297358-92620533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006260 IMP DNA replication
GO:0006364 IMP rRNA processing
GO:0030307 IMP positive regulation of cell growth
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044143 nol8 nucleolar protein 8 protein_coding Danio_rerio
ENSMUSG00000021392 Nol8 nucleolar protein 8 protein_coding Mus_musculus

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