C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 4, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198178 CLEC4C 9606 - 12:7729415-7751605 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354629 CLEC4C-004 7729415-7751605 protein_coding
  ENST00000360345 CLEC4C-003 7729442-7747522 protein_coding
  ENST00000537530 CLEC4C-006 7729443-7737575 protein_coding
  ENST00000540085 CLEC4C-201 7729442-7747505 protein_coding
  ENST00000542353 CLEC4C-001 7729415-7749473 protein_coding
  ENST00000543765 CLEC4C-005 7729704-7747339 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000354629ENST00000360345ENST00000537530ENST00000540085ENST00000542353ENST00000543765
Transcript ID Adipose Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000354629 N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00
ENST00000360345 N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A
ENST00000537530 N/A 0.034±0.00 0.335±0.00 N/A N/A N/A N/A N/A N/A
ENST00000540085 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00
ENST00000542353 0.020±0.00 0.047±0.00 0.014±0.00 0.010±0.00 0.067±0.01 0.080±0.00 0.023±0.00 N/A N/A
ENST00000543765 N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A 0.200±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008075 illr4 immune-related, lectin-like receptor 4 protein_coding Danio_rerio
ENSDARG00000008182 si:ch73-111e15.1 si:ch73-111e15.1 protein_coding Danio_rerio
ENSDARG00000018327 illr3 immune-related, lectin-like receptor 3 protein_coding Danio_rerio
ENSDARG00000025150 si:dkey-181c13.1 si:dkey-181c13.1 protein_coding Danio_rerio
ENSDARG00000026805 CR847844.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000029461 cd209 CD209 molecule protein_coding Danio_rerio
ENSDARG00000043894 si:ch211-214k5.3 si:ch211-214k5.3 protein_coding Danio_rerio
ENSDARG00000056379 si:ch211-154o6.6 si:ch211-154o6.6 protein_coding Danio_rerio
ENSDARG00000057090 CR847844.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000059254 illr1 immune-related, lectin-like receptor 1 protein_coding Danio_rerio
ENSDARG00000069323 si:ch73-122g19.1 si:ch73-122g19.1 protein_coding Danio_rerio
ENSDARG00000087245 CR847844.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088219 CR847844.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088614 BX936386.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088727 CR847844.6 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089377 si:ch211-232p21.6 si:ch211-232p21.6 protein_coding Danio_rerio
ENSDARG00000092749 si:ch211-133n4.12 si:ch211-133n4.12 protein_coding Danio_rerio
ENSDARG00000094796 si:ch211-133n4.11 si:ch211-133n4.11 protein_coding Danio_rerio
ENSDARG00000094882 illr2 immune-related, lectin-like receptor 2 protein_coding Danio_rerio
ENSDARG00000095424 si:ch211-133n4.7 si:ch211-133n4.7 protein_coding Danio_rerio
ENSDARG00000096624 si:dkey-187i8.2 si:dkey-187i8.2 protein_coding Danio_rerio

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