C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198223 CSF2RA 9606 + X:1268800-1310381 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355432 CSF2RA-004 1268845-1309934 protein_coding
  ENST00000355805 CSF2RA-002 1268845-1309934 protein_coding
  ENST00000381500 CSF2RA-007 1282686-1309638 protein_coding
  ENST00000381509 CSF2RA-005 1268832-1305941 protein_coding
  ENST00000381524 CSF2RA-001 1268808-1310381 protein_coding
  ENST00000381529 CSF2RA-006 1268800-1309922 protein_coding
  ENST00000412290 CSF2RA-009 1268818-1294395 protein_coding
  ENST00000417535 CSF2RA-201 1268800-1309935 protein_coding
  ENST00000419094 CSF2RA-010 1268830-1290427 protein_coding
  ENST00000432318 CSF2RA-202 1268800-1309935 protein_coding
  ENST00000475259 CSF2RA-016 1290453-1309922 processed_transcript
  ENST00000477940 CSF2RA-013 1285652-1288640 processed_transcript
  ENST00000478256 CSF2RA-014 1288598-1289105 processed_transcript
  ENST00000481245 CSF2RA-011 1268835-1282220 processed_transcript
  ENST00000486791 CSF2RA-003 1268845-1309934 nonsense_mediated_decay
  ENST00000491683 CSF2RA-015 1294225-1295578 processed_transcript
  ENST00000493312 CSF2RA-008 1268814-1300543 processed_transcript
  ENST00000494969 CSF2RA-012 1268832-1309922 protein_coding
  ENST00000498153 CSF2RA-017 1294328-1309934 processed_transcript
  ENST00000501036 CSF2RA-203 1268800-1309935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355432ENST00000355805ENST00000381500ENST00000381509ENST00000381524ENST00000381529ENST00000412290ENST00000417535ENST00000432318ENST00000475259ENST00000477940ENST00000478256ENST00000481245ENST00000486791ENST00000491683ENST00000493312ENST00000494969ENST00000498153ENST00000501036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355432 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.944±0.00 N/A N/A N/A N/A
ENST00000355805 N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00 N/A 0.042±0.00 0.329±0.00 N/A N/A
ENST00000381500 N/A N/A N/A N/A N/A 0.173±0.00 N/A 0.965±0.00 N/A 1.035±0.00 N/A 0.498±0.02 N/A N/A
ENST00000381509 N/A 1.167±0.00 N/A N/A 1.051±0.00 N/A N/A N/A N/A N/A N/A 0.367±0.00 N/A 0.185±0.00
ENST00000381524 1.538±0.00 N/A N/A 0.475±0.00 0.958±0.00 0.068±0.00 0.172±0.00 0.266±0.00 0.460±0.00 0.516±0.00 N/A 0.260±0.05 N/A N/A
ENST00000381529 4.524±0.00 N/A N/A N/A 1.549±1.04 0.147±0.00 N/A 0.276±0.00 0.287±0.00 0.972±0.00 N/A 0.242±0.01 29.599±8.91 0.087±0.00
ENST00000412290 N/A N/A 0.952±0.00 N/A 1.275±0.00 N/A N/A N/A N/A 3.618±0.00 N/A N/A N/A N/A
ENST00000417535 3.188±0.00 N/A N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A N/A 0.192±0.00 11.476±1.87 N/A
ENST00000432318 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.844±0.00 N/A 0.254±0.00 N/A N/A
ENST00000475259 N/A N/A N/A N/A N/A N/A N/A 0.933±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477940 N/A 2.252±0.00 N/A 1.023±0.00 6.689±0.00 0.952±0.34 0.913±0.00 2.037±0.00 2.084±1.51 4.529±0.00 N/A N/A N/A 1.340±0.00
ENST00000478256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.313±0.00
ENST00000481245 N/A 2.728±0.00 N/A N/A N/A 0.765±0.00 N/A 1.196±0.00 N/A N/A N/A N/A N/A 0.247±0.00
ENST00000486791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.455±9.68 N/A
ENST00000491683 N/A N/A N/A N/A N/A N/A 0.397±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000493312 N/A N/A N/A N/A N/A N/A N/A 0.481±0.00 N/A N/A N/A 0.823±0.00 N/A N/A
ENST00000494969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00
ENST00000498153 N/A 1.139±0.00 N/A N/A 1.401±0.53 0.537±0.29 0.898±0.00 1.066±0.00 0.421±0.00 2.005±0.00 0.244±0.00 0.925±0.02 N/A 0.287±0.09
ENST00000501036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.528±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0004896 IEA cytokine receptor activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0016020 IEA membrane
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0045471 IEA response to ethanol

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000059326 Csf2ra colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein_coding Mus_musculus

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