C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 116
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198270 TMEM116 9606 - 12:111931282-112013185 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355445 TMEM116-007 111931298-112013139 protein_coding
  ENST00000437003 TMEM116-019 112010425-112013185 processed_transcript
  ENST00000546537 TMEM116-017 111938184-112013165 nonsense_mediated_decay
  ENST00000546962 TMEM116-013 111991744-112006005 protein_coding
  ENST00000547878 TMEM116-004 111931299-112013131 nonsense_mediated_decay
  ENST00000548283 TMEM116-006 111932585-112013139 retained_intron
  ENST00000549425 TMEM116-010 111943261-112006126 protein_coding
  ENST00000549537 TMEM116-003 111931370-112013135 protein_coding
  ENST00000550020 TMEM116-018 111938047-112013166 retained_intron
  ENST00000550037 TMEM116-012 111936755-112006030 protein_coding
  ENST00000550233 TMEM116-009 111991814-112005985 protein_coding
  ENST00000550800 TMEM116-014 111936692-112006024 protein_coding
  ENST00000550831 TMEM116-005 111931282-112013125 protein_coding
  ENST00000551297 TMEM116-016 111937175-112013142 nonsense_mediated_decay
  ENST00000552374 TMEM116-001 111931370-112013111 protein_coding
  ENST00000552800 TMEM116-008 112003569-112013144 retained_intron
  ENST00000552801 TMEM116-002 111931380-112013152 retained_intron
  ENST00000552839 TMEM116-011 111965592-112013165 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355445ENST00000437003ENST00000547878ENST00000548283ENST00000549537ENST00000550037ENST00000550233ENST00000550831ENST00000551297ENST00000552374ENST00000552801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355445 N/A N/A N/A N/A N/A N/A N/A 2.574±0.00 0.348±0.00 1.085±0.00 N/A 1.116±0.00 0.562±0.06 N/A
ENST00000437003 0.269±0.00 0.531±0.00 N/A 0.267±0.00 0.306±0.00 0.414±0.00 N/A N/A 0.134±0.00 N/A N/A 0.858±0.31 0.224±0.00 1.207±0.00
ENST00000547878 N/A N/A N/A 1.195±0.90 0.363±0.00 N/A 1.788±0.00 N/A N/A N/A N/A 0.802±0.00 0.382±0.00 N/A
ENST00000548283 N/A N/A N/A 0.397±0.00 0.143±0.00 0.169±0.00 0.966±0.00 N/A N/A 0.446±0.00 0.342±0.00 N/A N/A N/A
ENST00000549537 N/A N/A N/A N/A N/A N/A N/A 2.609±0.00 N/A N/A N/A 1.527±0.00 N/A N/A
ENST00000550037 N/A N/A 3.553±0.00 5.409±0.00 N/A N/A 5.581±0.00 N/A N/A N/A N/A 4.489±0.00 N/A N/A
ENST00000550233 N/A N/A 7.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550831 1.088±0.00 0.636±0.00 N/A 0.544±0.00 1.068±0.00 1.144±0.00 3.630±0.00 3.039±0.00 2.211±1.43 2.243±0.00 1.634±0.00 2.034±0.50 1.471±0.00 6.774±0.00
ENST00000551297 N/A N/A N/A N/A N/A N/A N/A 4.697±0.00 N/A N/A N/A N/A N/A N/A
ENST00000552374 N/A N/A 1.592±0.00 N/A 0.727±0.00 0.537±0.00 2.938±0.00 7.524±0.00 N/A 1.031±0.00 0.471±0.00 1.406±0.00 1.559±0.30 8.368±2.79
ENST00000552801 N/A 0.838±0.00 N/A 0.687±0.00 N/A N/A N/A N/A N/A 0.930±0.00 N/A N/A N/A 1.976±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077155 TMEM116 transmembrane protein 116 protein_coding Danio_rerio
ENSMUSG00000029452 Tmem116 transmembrane protein 116 protein_coding Mus_musculus

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