C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SDA1 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198301 SDAD1 9606 - 4:75940950-75990962 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356260 SDAD1-001 75949916-75990960 protein_coding
  ENST00000395710 SDAD1-002 75949906-75990938 nonsense_mediated_decay
  ENST00000395711 SDAD1-003 75950286-75990937 protein_coding
  ENST00000502543 SDAD1-011 75940950-75957371 processed_transcript
  ENST00000503411 SDAD1-007 75973360-75990931 nonsense_mediated_decay
  ENST00000504975 SDAD1-004 75977669-75990962 processed_transcript
  ENST00000507396 SDAD1-006 75965784-75975844 processed_transcript
  ENST00000513089 SDAD1-012 75960122-75973391 processed_transcript
  ENST00000514710 SDAD1-005 75977723-75990945 nonsense_mediated_decay
  ENST00000515836 SDAD1-009 75971385-75977685 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyMuscleOvaryPlacentaTestisENST00000356260ENST00000395710ENST00000395711ENST00000503411ENST00000513089
Transcript ID Bladder Brain Heart Kidney Muscle Ovary Placenta Testis
ENST00000356260 2.984±0.00 N/A N/A N/A 0.727±0.00 N/A N/A 9.791±0.00
ENST00000395710 N/A 2.063±0.00 0.727±0.00 N/A N/A N/A N/A N/A
ENST00000395711 N/A 4.163±1.51 0.395±0.00 1.391±0.00 5.934±0.00 N/A N/A N/A
ENST00000503411 N/A N/A N/A N/A 1.772±0.00 N/A N/A N/A
ENST00000513089 7.680±0.00 N/A N/A N/A 1.469±0.00 15.088±0.00 7.850±0.00 20.947±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071K CIL_00071K_0001 CGP 4:75859864-75941051
CIL_00071N CIL_00071N_0001 CGP 4:75913657-75990962

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000055 IEA ribosomal large subunit export from nucleus
GO:0003674 ND molecular_function
GO:0005488 IEA binding
GO:0005730 IDA nucleolus
GO:0015031 IEA protein transport
GO:0030036 IEA actin cytoskeleton organization
GO:0042273 ISS ribosomal large subunit biogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068903 sdad1 SDA1 domain containing 1 protein_coding Danio_rerio
ENSMUSG00000029415 Sdad1 SDA1 domain containing 1 protein_coding Mus_musculus

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