C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 1 open reading frame 228
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198520 C1orf228 9606 + 1:44674692-44725591 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357508 C1orf228-005 44674722-44725589 retained_intron
  ENST00000418644 C1orf228-016 44674713-44698133 protein_coding
  ENST00000418779 C1orf228-019 44724373-44725591 retained_intron
  ENST00000421398 C1orf228-004 44674758-44724362 processed_transcript
  ENST00000424484 C1orf228-003 44674692-44724474 retained_intron
  ENST00000427321 C1orf228-011 44723785-44724427 retained_intron
  ENST00000427336 C1orf228-007 44723844-44724380 retained_intron
  ENST00000434068 C1orf228-002 44689834-44724380 protein_coding
  ENST00000434520 C1orf228-006 44700973-44724379 processed_transcript
  ENST00000440383 C1orf228-009 44723831-44724362 retained_intron
  ENST00000441519 C1orf228-015 44674722-44704111 protein_coding
  ENST00000444525 C1orf228-010 44723795-44724304 retained_intron
  ENST00000444751 C1orf228-001 44674780-44724343 processed_transcript
  ENST00000445071 C1orf228-017 44674726-44701109 protein_coding
  ENST00000446792 C1orf228-008 44723792-44724378 processed_transcript
  ENST00000453711 C1orf228-012 44674755-44697140 protein_coding
  ENST00000455805 C1orf228-014 44674713-44704111 nonsense_mediated_decay
  ENST00000458657 C1orf228-013 44674713-44725591 protein_coding
  ENST00000535358 C1orf228-201 44674722-44725591 protein_coding
  ENST00000568406 C1orf228-020 44724507-44725591 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357508ENST00000418644ENST00000418779ENST00000424484ENST00000427321ENST00000434068ENST00000434520ENST00000441519ENST00000444525ENST00000444751ENST00000445071ENST00000446792ENST00000453711ENST00000455805ENST00000458657ENST00000535358ENST00000568406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357508 0.037±0.00 N/A N/A 0.273±0.00 N/A N/A N/A N/A N/A 0.110±0.00 N/A 0.722±0.00 N/A 1.785±0.00
ENST00000418644 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418779 0.475±0.00 N/A 0.082±0.00 N/A N/A N/A 0.197±0.00 N/A N/A 0.244±0.00 0.193±0.00 0.875±0.08 0.163±0.00 5.547±0.00
ENST00000424484 N/A N/A N/A 0.502±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427321 N/A N/A N/A N/A N/A 2.565±0.00 N/A N/A N/A N/A N/A N/A 0.859±0.00 N/A
ENST00000434068 N/A N/A N/A N/A N/A N/A N/A 0.521±0.37 N/A N/A N/A N/A 0.152±0.00 N/A
ENST00000434520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.00 N/A N/A
ENST00000441519 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.681±0.00 N/A 0.469±0.00 N/A 7.376±0.00
ENST00000444525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.329±0.00 N/A
ENST00000444751 N/A N/A N/A 0.252±0.00 N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A
ENST00000445071 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A 0.069±0.00 N/A 1.629±0.00
ENST00000446792 N/A N/A N/A N/A N/A 0.312±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453711 N/A N/A N/A 0.115±0.00 N/A 0.318±0.00 0.084±0.00 0.489±0.00 0.312±0.13 N/A 0.077±0.00 0.157±0.00 0.123±0.00 N/A
ENST00000455805 N/A N/A N/A 0.079±0.00 N/A 0.141±0.00 N/A 0.086±0.00 N/A N/A N/A 0.252±0.19 0.041±0.00 3.346±0.00
ENST00000458657 N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A N/A N/A N/A 1.886±0.84
ENST00000535358 N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A N/A 0.046±0.00 N/A
ENST00000568406 N/A 2.213±0.00 0.191±0.00 N/A 0.475±0.00 0.146±0.00 0.100±0.00 N/A 0.591±0.00 4.735±0.00 N/A 0.918±0.47 0.262±0.19 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0001 VISTA 1:44224152-44825477

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029859 C8H1orf228 chromosome 1 open reading frame 228 protein_coding Danio_rerio
ENSMUSG00000060268 Gm1661 predicted gene 1661 protein_coding Mus_musculus

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