C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 536
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198597 ZNF536 9606 + 19:30228290-30713538 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355537 ZNF536-004 30372412-30558059 protein_coding
  ENST00000585628 ZNF536-003 30228514-30548468 protein_coding
  ENST00000590564 ZNF536-001 30228290-30300669 processed_transcript
  ENST00000591488 ZNF536-002 30228554-30443978 protein_coding
  ENST00000592773 ZNF536-005 30549346-30713538 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355537ENST00000585628ENST00000591488ENST00000592773
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355537 N/A 0.123±0.00 5.506±4.18 N/A 0.835±0.00 0.178±0.05 0.039±0.00 N/A 0.012±0.00 0.025±0.00 0.026±0.02 N/A 0.724±0.12
ENST00000585628 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 0.192±0.00 N/A N/A N/A
ENST00000591488 N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A
ENST00000592773 N/A 0.091±0.00 2.281±1.08 0.026±0.00 0.368±0.17 N/A 0.013±0.00 0.094±0.09 0.037±0.02 N/A 0.021±0.01 0.011±0.00 0.632±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000835 CIL_000835_0001 VISTA 19:29703707-30304596
CIL_000834 CIL_000834_0001 VISTA 19:29775043-30376109
CIL_00090S CIL_00090S_0001 VISTA 19:29783480-30384453
CIL_0007OB CIL_0007OB_0001 UCNEbase 19:29888853-30910612
CIL_0007PW CIL_0007PW_0001 VISTA 19:29956150-30557741
CIL_000833 CIL_000833_0001 VISTA 19:29976151-30577366
CIL_000825 CIL_000825_0001 VISTA 19:30049392-30652629
CIL_000907 CIL_000907_0001 VISTA 19:30070281-30671909
CIL_00088T CIL_00088T_0001 VISTA 19:30101501-30702618
CIL_000832 CIL_000832_0001 VISTA 19:30212034-30813355
CIL_0004NK CIL_0004NK_0002 CGP 19:30228290-31349547

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0044323 IEA retinoic acid-responsive element binding
GO:0045665 IEA negative regulation of neuron differentiation
GO:0046872 IEA metal ion binding
GO:0048387 IEA negative regulation of retinoic acid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022251 znf536 zinc finger protein 536 protein_coding Danio_rerio
ENSMUSG00000043456 Zfp536 zinc finger protein 536 protein_coding Mus_musculus

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