C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 6 open reading frame 89
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198663 C6orf89 9606 + 6:36871870-36928964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355190 C6orf89-002 36885864-36923522 protein_coding
  ENST00000359359 C6orf89-001 36871870-36924555 protein_coding
  ENST00000373685 C6orf89-003 36885864-36923522 protein_coding
  ENST00000480824 C6orf89-004 36885854-36928964 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355190ENST00000359359ENST00000480824
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355190 N/A N/A 5.704±0.00 N/A 4.971±0.00 N/A N/A 7.043±1.88 3.256±0.00 6.429±0.00 14.259±0.00 24.963±0.00
ENST00000359359 N/A N/A 2.766±0.00 N/A N/A 2.714±0.00 N/A N/A N/A N/A N/A 9.531±0.00
ENST00000480824 3.001±0.00 5.531±1.27 3.103±0.55 3.828±0.95 3.795±1.06 1.583±0.00 4.428±2.64 4.272±0.00 N/A 8.669±5.76 5.694±3.72 8.966±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Y7 CIL_0002Y7_0001 CGP 6:36740775-36875024
CIL_00089L CIL_00089L_0001 VISTA 6:36799205-37399713
CIL_0002Y6 CIL_0002Y6_0001 CGP 6:36854827-36928964
CIL_0002Y9 CIL_0002Y9_0001 CGP 6:36871870-36964837

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0042060 IDA wound healing
GO:0045787 IDA positive regulation of cell cycle
GO:0050673 IDA epithelial cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078301 C22H6orf89 chromosome 6 open reading frame 89 protein_coding Danio_rerio
ENSMUSG00000052712 BC004004 cDNA sequence BC004004 protein_coding Mus_musculus

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