Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	chromosome 6 open reading frame 89
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000198663	C6orf89	9606	+	6:36871870-36928964	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000355190		C6orf89-002	36885864-36923522	protein_coding
	ENST00000359359		C6orf89-001	36871870-36924555	protein_coding
	ENST00000373685		C6orf89-003	36885864-36923522	protein_coding
	ENST00000480824		C6orf89-004	36885854-36928964	protein_coding

Expression Patterns

Transcript ID	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000355190	N/A	N/A	5.704±0.00	N/A	4.971±0.00	N/A	N/A	7.043±1.88	3.256±0.00	6.429±0.00	14.259±0.00	24.963±0.00
ENST00000359359	N/A	N/A	2.766±0.00	N/A	N/A	2.714±0.00	N/A	N/A	N/A	N/A	N/A	9.531±0.00
ENST00000480824	3.001±0.00	5.531±1.27	3.103±0.55	3.828±0.95	3.795±1.06	1.583±0.00	4.428±2.64	4.272±0.00	N/A	8.669±5.76	5.694±3.72	8.966±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0002Y7	CIL_0002Y7_0001	CGP	6:36740775-36875024
CIL_00089L	CIL_00089L_0001	VISTA	6:36799205-37399713
CIL_0002Y6	CIL_0002Y6_0001	CGP	6:36854827-36928964
CIL_0002Y9	CIL_0002Y9_0001	CGP	6:36871870-36964837

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005634	IEA	nucleus
GO:0005737	IDA	cytoplasm
GO:0005794	IEA	Golgi apparatus
GO:0005886	IDA	plasma membrane
GO:0016021	IEA	integral component of membrane
GO:0042060	IDA	wound healing
GO:0045787	IDA	positive regulation of cell cycle
GO:0050673	IDA	epithelial cell proliferation

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000078301	C22H6orf89	chromosome 6 open reading frame 89	protein_coding	Danio_rerio
ENSMUSG00000052712	BC004004	cDNA sequence BC004004	protein_coding	Mus_musculus

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