C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 13B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198720 ANKRD13B 9606 + 17:29589769-29614761 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000394859 ANKRD13B-001 29593468-29614761 protein_coding
  ENST00000487527 ANKRD13B-002 29589783-29614761 retained_intron
  ENST00000488766 ANKRD13B-004 29593468-29614761 nonsense_mediated_decay
  ENST00000493506 ANKRD13B-003 29599383-29614760 retained_intron
  ENST00000578811 ANKRD13B-007 29599412-29608956 retained_intron
  ENST00000578943 ANKRD13B-006 29608652-29610748 retained_intron
  ENST00000579719 ANKRD13B-008 29612464-29613174 protein_coding
  ENST00000583728 ANKRD13B-005 29589769-29609122 protein_coding
  ENST00000614878 ANKRD13B-201 29593468-29614760 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryTestisENST00000394859ENST00000487527ENST00000493506ENST00000578943
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000394859 2.260±0.00 N/A 1.899±0.00 3.665±0.00 2.529±0.00 0.477±0.00 N/A 1.298±0.00 6.505±0.35 4.123±0.92
ENST00000487527 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A 1.609±1.37 N/A
ENST00000493506 N/A 0.033±0.00 N/A N/A N/A N/A N/A 0.197±0.00 1.193±0.00 N/A
ENST00000578943 N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BZ CIL_0009BZ_0001 VISTA 17:29367684-29969856
CIL_000873 CIL_000873_0001 VISTA 17:29367702-29969870
CIL_0004GJ CIL_0004GJ_0002 CGP 17:29573469-29614761

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014652 ankrd13b ankyrin repeat domain 13B protein_coding Danio_rerio
ENSMUSG00000037907 Ankrd13b ankyrin repeat domain 13b protein_coding Mus_musculus

Loading