C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and immunoglobulin-like domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198799 LRIG2 9606 + 1:113073209-113132260 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361127 LRIG2-001 113073209-113132260 protein_coding
  ENST00000466069 LRIG2-004 113098723-113107826 processed_transcript
  ENST00000466161 LRIG2-003 113103201-113124997 processed_transcript
  ENST00000470000 LRIG2-005 113100211-113100712 processed_transcript
  ENST00000492207 LRIG2-002 113100397-113127200 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361127ENST00000466161ENST00000492207
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361127 0.700±0.00 0.461±0.00 N/A 0.974±0.05 1.172±0.00 0.873±0.00 0.464±0.02 0.761±0.42 0.743±0.55 1.408±0.00 0.331±0.19 0.859±0.76 0.384±0.27 1.472±0.01
ENST00000466161 0.675±0.00 3.490±0.00 1.298±0.00 1.298±0.00 1.350±0.00 2.004±0.00 0.657±0.13 N/A 0.753±0.58 1.735±0.19 N/A 1.555±0.32 1.615±0.31 1.577±0.50
ENST00000492207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.475±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000878 CIL_000878_0001 VISTA 1:112697401-113299438
CIL_0009BY CIL_0009BY_0001 VISTA 1:112697434-113299398

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007605 IEA sensory perception of sound
GO:0010640 IEA regulation of platelet-derived growth factor receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0060384 IEA innervation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078561 lrig2 leucine-rich repeats and immunoglobulin-like domains 2 protein_coding Danio_rerio
ENSMUSG00000032913 Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 protein_coding Mus_musculus

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