C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: inverted formin, FH2 and WH2 domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000203485 INF2 9606 + 14:104689606-104722535 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252527 INF2-010 104707864-104719605 protein_coding
  ENST00000330634 INF2-003 104689606-104722535 protein_coding
  ENST00000392634 INF2-001 104689637-104719603 protein_coding
  ENST00000398337 INF2-009 104689621-104704809 protein_coding
  ENST00000474229 INF2-006 104708291-104711664 retained_intron
  ENST00000477497 INF2-008 104712713-104713606 retained_intron
  ENST00000480763 INF2-007 104710725-104712933 retained_intron
  ENST00000481338 INF2-005 104715725-104719603 processed_transcript
  ENST00000617571 INF2-201 104707864-104719605 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252527ENST00000330634ENST00000392634ENST00000398337ENST00000477497ENST00000617571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252527 N/A N/A N/A N/A 2.416±0.00 N/A N/A N/A N/A N/A N/A 0.399±0.00 N/A N/A
ENST00000330634 N/A 2.183±0.00 1.059±0.00 0.569±0.00 0.771±0.00 0.591±0.00 0.499±0.18 N/A N/A N/A N/A 1.470±0.79 5.243±0.80 1.218±0.01
ENST00000392634 31.179±0.00 11.178±0.00 N/A 10.601±8.19 19.048±17.50 9.233±6.23 4.000±0.00 5.246±3.49 9.474±0.00 7.771±5.88 9.853±0.00 8.118±5.25 25.448±1.44 8.327±0.97
ENST00000398337 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.307±0.00 N/A 7.514±0.00 N/A N/A
ENST00000477497 N/A N/A N/A N/A N/A 5.374±0.00 N/A 3.792±0.00 N/A N/A N/A N/A N/A N/A
ENST00000617571 18.523±0.00 14.413±0.00 N/A 11.305±0.00 31.889±0.00 13.165±0.00 2.573±0.00 8.275±0.00 6.499±0.00 11.395±0.00 6.886±0.00 12.133±0.00 21.141±3.83 5.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XC CIL_0006XC_0001 CGP 14:104689606-104747325

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005488 IEA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0008219 IEA cell death
GO:0016043 IEA cellular component organization
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization
GO:0032535 IEA regulation of cellular component size
GO:0048471 IDA perinuclear region of cytoplasm
GO:0090140 IMP regulation of mitochondrial fission

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015102 INF2 inverted formin, FH2 and WH2 domain containing protein_coding Danio_rerio
ENSMUSG00000037679 Inf2 inverted formin, FH2 and WH2 domain containing protein_coding Mus_musculus

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