C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000203943 SAMD13 9606 + 1:84298366-84389957 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370668 SAMD13-001 84302651-84350796 protein_coding
  ENST00000370669 SAMD13-005 84301720-84349994 protein_coding
  ENST00000370670 SAMD13-008 84303033-84349930 protein_coding
  ENST00000370671 SAMD13-003 84299558-84350070 protein_coding
  ENST00000370673 SAMD13-002 84298366-84350798 protein_coding
  ENST00000394834 SAMD13-004 84301606-84350022 protein_coding
  ENST00000454967 SAMD13-007 84325680-84389957 protein_coding
  ENST00000463429 SAMD13-009 84301656-84304278 retained_intron
  ENST00000479082 SAMD13-006 84301723-84303888 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370668ENST00000370669ENST00000370670ENST00000370673ENST00000394834ENST00000463429ENST00000479082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370668 N/A 0.254±0.00 0.117±0.00 0.294±0.00 N/A N/A 0.068±0.04 0.627±0.00 N/A 0.046±0.00 N/A N/A 0.255±0.01 N/A
ENST00000370669 N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370670 N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A 0.219±0.00 N/A
ENST00000370673 0.183±0.00 N/A N/A 0.191±0.00 0.434±0.00 1.641±0.00 0.180±0.00 N/A 0.087±0.00 0.046±0.00 3.140±0.00 0.221±0.02 0.615±0.00 4.006±0.27
ENST00000394834 N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A 0.323±0.00 N/A N/A 0.168±0.00 N/A N/A
ENST00000463429 N/A N/A N/A 0.410±0.00 0.094±0.00 N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A
ENST00000479082 0.072±0.00 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062977 samd13 sterile alpha motif domain containing 13 protein_coding Danio_rerio
ENSMUSG00000048652 Samd13 sterile alpha motif domain containing 13 protein_coding Mus_musculus

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