C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ArfGAP with GTPase domain, ankyrin repeat and PH domain 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204149 AGAP6 9606 + 10:49982190-50010499 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374056 AGAP6-201 49988318-50010499 protein_coding
  ENST00000412531 AGAP6-001 49988644-50010425 protein_coding
  ENST00000618025 AGAP6-002 49982190-50010497 protein_coding
  ENST00000622418 AGAP6-202 49988604-50010407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374056ENST00000412531ENST00000618025ENST00000622418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374056 0.250±0.00 1.650±0.00 0.375±0.00 0.341±0.05 0.426±0.01 0.155±0.00 0.124±0.01 0.493±0.36 0.310±0.02 0.332±0.14 0.073±0.00 0.801±0.49 0.526±0.15 0.626±0.00
ENST00000412531 N/A N/A 0.440±0.00 0.501±0.11 0.466±0.03 N/A N/A 0.487±0.00 0.198±0.00 0.411±0.00 N/A 2.154±1.41 0.388±0.03 4.390±0.00
ENST00000618025 0.162±0.00 1.305±0.00 0.252±0.00 0.335±0.00 0.206±0.05 0.148±0.08 0.192±0.00 0.263±0.00 0.185±0.00 0.225±0.00 N/A 0.507±0.24 N/A 0.429±0.30
ENST00000622418 N/A N/A N/A N/A 0.677±0.00 0.275±0.00 0.235±0.07 0.574±0.00 N/A 0.720±0.00 0.644±0.36 0.587±0.00 N/A 0.194±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062123 agap1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein_coding Danio_rerio

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