C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chorionic somatomammotropin hormone-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204414 CSHL1 9606 - 17:63909597-63918838 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259003 CSHL1-002 63909600-63911341 protein_coding
  ENST00000309894 CSHL1-009 63909711-63911196 protein_coding
  ENST00000346606 CSHL1-001 63909607-63911258 protein_coding
  ENST00000392824 CSHL1-201 63909604-63918838 protein_coding
  ENST00000438387 CSHL1-008 63909605-63911236 protein_coding
  ENST00000450719 CSHL1-006 63909616-63911328 protein_coding
  ENST00000558099 CSHL1-004 63909617-63911299 processed_transcript
  ENST00000558609 CSHL1-005 63909652-63911247 retained_intron
  ENST00000560999 CSHL1-007 63909633-63911234 retained_intron
  ENST00000561003 CSHL1-003 63909597-63911289 protein_coding
  ENST00000611417 CSHL1-202 63909605-63910934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryPlacentaTestisENST00000309894ENST00000346606ENST00000392824ENST00000438387ENST00000558609
Transcript ID Heart Ovary Placenta Testis
ENST00000309894 0.167±0.00 N/A N/A N/A
ENST00000346606 N/A N/A 64.234±24.75 N/A
ENST00000392824 N/A N/A N/A 0.143±0.00
ENST00000438387 N/A 0.097±0.00 38.362±24.33 N/A
ENST00000558609 N/A N/A 9.548±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005179 IEA hormone activity
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038185 gh1 growth hormone 1 protein_coding Danio_rerio
ENSMUSG00000020713 Gh growth hormone protein_coding Mus_musculus

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