C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204569 PPP1R10 9606 - 6:30600400-30618612 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376511 PPP1R10-001 30600400-30617244 protein_coding
  ENST00000461593 PPP1R10-004 30605018-30606737 retained_intron
  ENST00000468181 PPP1R10-005 30605809-30606243 retained_intron
  ENST00000473954 PPP1R10-002 30616584-30618612 processed_transcript
  ENST00000476704 PPP1R10-006 30604612-30605998 retained_intron
  ENST00000484449 PPP1R10-003 30609947-30617244 processed_transcript
  ENST00000496955 PPP1R10-007 30603573-30604212 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376511ENST00000476704ENST00000484449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376511 7.194±0.00 11.610±0.00 3.615±0.00 5.259±2.18 5.411±2.59 3.369±0.66 3.114±2.71 5.079±1.69 4.297±0.92 2.500±1.42 6.791±0.00 9.745±6.17 8.841±1.06 15.332±1.74
ENST00000476704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.137±0.00 N/A N/A N/A
ENST00000484449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.755±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784
CIL_0001FO CIL_0001FO_0002 CGP 6:30600400-30626395

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0003677 IEA DNA binding
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006606 TAS protein import into nucleus
GO:0043086 IEA negative regulation of catalytic activity
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0072357 ISS PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032651 ppp1r10 protein phosphatase 1, regulatory subunit 10 protein_coding Danio_rerio
ENSMUSG00000039220 Ppp1r10 protein phosphatase 1, regulatory subunit 10 protein_coding Mus_musculus

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