C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanine nucleotide binding protein-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204590 GNL1 9606 - 6:30541377-30557174 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376621 GNL1-001 30541377-30557174 protein_coding
  ENST00000433809 GNL1-002 30553360-30556088 protein_coding
  ENST00000462708 GNL1-005 30546485-30552546 retained_intron
  ENST00000464231 GNL1-004 30547196-30547817 retained_intron
  ENST00000487166 GNL1-003 30552177-30553120 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376621ENST00000433809ENST00000462708
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376621 3.532±0.00 4.097±0.00 0.270±0.00 14.503±11.23 2.007±1.61 N/A 0.421±0.24 3.502±0.00 0.703±0.00 3.577±3.09 0.615±0.37 4.480±2.99 3.495±0.66 6.489±0.88
ENST00000433809 N/A N/A 1.980±0.00 N/A 8.869±7.90 N/A 4.740±0.00 N/A 4.058±0.00 1.324±0.00 4.330±0.00 N/A N/A N/A
ENST00000462708 24.378±0.00 N/A N/A N/A 9.965±7.32 23.501±0.00 1.044±0.00 N/A 6.509±0.00 N/A 4.298±2.40 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002456 NAS T cell mediated immunity
GO:0003924 IBA GTPase activity
GO:0005198 NAS structural molecule activity
GO:0005525 NAS:IEA GTP binding
GO:0005615 NAS extracellular space
GO:0005634 IDA nucleus
GO:0005829 IBA cytosol
GO:0006184 IBA GTP catabolic process
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0007165 NAS signal transduction
GO:0042254 IBA ribosome biogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061789 gnl1 guanine nucleotide binding protein-like 1 protein_coding Danio_rerio
ENSMUSG00000024429 Gnl1 guanine nucleotide binding protein-like 1 protein_coding Mus_musculus

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