C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB12, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000206418 RAB12 9606 + 18:8609445-8639381 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329286 RAB12-001 8609445-8639381 protein_coding
  ENST00000580987 RAB12-002 8632859-8635567 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329286ENST00000580987
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329286 11.483±0.00 12.687±0.00 2.482±0.00 11.497±0.37 9.169±5.70 9.758±8.82 17.999±12.09 10.339±4.02 9.612±1.41 14.800±10.79 38.161±24.80 14.648±6.07 18.555±5.57 11.141±0.23
ENST00000580987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.435±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025R CIL_00025R_0002 CGP 18:8609445-8832778

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005764 ISS lysosome
GO:0005776 IEA autophagic vacuole
GO:0005794 IEA Golgi apparatus
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0006914 IEA autophagy
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008333 ISS endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016239 IEA positive regulation of macroautophagy
GO:0019003 IDA GDP binding
GO:0030141 IEA secretory granule
GO:0044257 ISS cellular protein catabolic process
GO:0055038 ISS recycling endosome membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089428 rab12 RAB12, member RAS oncogene family protein_coding Danio_rerio
ENSMUSG00000023460 Rab12 RAB12, member RAS oncogene family protein_coding Mus_musculus

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