C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class I, B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000206450 HLA-B 9606 - CHR_HSCHR6_MHC_QBL_CTG1:31343976-31347305 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359635 HLA-B-001 31343976-31347305 protein_coding
  ENST00000418147 HLA-B-006 31343976-31346506 protein_coding
  ENST00000466304 HLA-B-003 31345612-31347292 retained_intron
  ENST00000475493 HLA-B-005 31345216-31345904 retained_intron
  ENST00000479203 HLA-B-004 31345276-31347264 nonsense_mediated_decay
  ENST00000479990 HLA-B-007 31343976-31345170 retained_intron
  ENST00000490054 HLA-B-008 31343976-31344900 retained_intron
  ENST00000493512 HLA-B-002 31345496-31347283 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001916 IEA:IDA positive regulation of T cell mediated cytotoxicity
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002480 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0002486 IDA antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0006955 IEA immune response
GO:0009986 ISS:IDA cell surface
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IDA:IEA membrane
GO:0016032 IEA viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019882 IEA antigen processing and presentation
GO:0030670 TAS phagocytic vesicle membrane
GO:0031901 TAS early endosome membrane
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042605 ISS:IDA peptide antigen binding
GO:0042612 ISS:IDA:IEA MHC class I protein complex
GO:0050776 TAS regulation of immune response
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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