C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cilia and flagella associated protein 44
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000206530 CFAP44 9606 - 3:113286930-113441610 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295868 CFAP44-001 113362865-113441610 protein_coding
  ENST00000393845 CFAP44-201 113286930-113441514 protein_coding
  ENST00000461734 CFAP44-010 113290853-113327797 nonsense_mediated_decay
  ENST00000465186 CFAP44-008 113399968-113403878 nonsense_mediated_decay
  ENST00000465510 CFAP44-012 113294750-113304277 retained_intron
  ENST00000465636 CFAP44-003 113290120-113366162 protein_coding
  ENST00000473143 CFAP44-004 113427187-113434945 protein_coding
  ENST00000475568 CFAP44-006 113381015-113397344 processed_transcript
  ENST00000479422 CFAP44-009 113425982-113441515 retained_intron
  ENST00000484923 CFAP44-013 113291533-113294456 retained_intron
  ENST00000488854 CFAP44-002 113362848-113441513 nonsense_mediated_decay
  ENST00000489244 CFAP44-011 113286947-113304067 nonsense_mediated_decay
  ENST00000489938 CFAP44-005 113404011-113433581 nonsense_mediated_decay
  ENST00000490481 CFAP44-007 113333451-113363310 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295868ENST00000393845ENST00000461734ENST00000465636ENST00000488854ENST00000489244
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295868 N/A 0.594±0.00 0.713±0.00 N/A 2.808±0.00 0.524±0.00 N/A N/A 3.421±0.00 N/A N/A N/A 5.730±0.00
ENST00000393845 N/A 0.329±0.00 0.519±0.00 1.010±0.00 0.931±0.00 0.161±0.00 N/A 1.262±0.00 0.733±0.00 N/A 1.000±0.33 N/A 1.537±0.09
ENST00000461734 N/A 1.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465636 N/A N/A N/A N/A N/A 0.190±0.00 0.436±0.00 N/A 0.830±0.00 N/A 1.538±0.10 N/A 5.549±0.00
ENST00000488854 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A
ENST00000489244 1.128±0.00 N/A 0.740±0.01 N/A 2.621±0.00 N/A N/A 0.172±0.00 N/A 0.434±0.00 2.117±0.00 0.280±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UB CIL_0008UB_0001 VISTA 3:112792647-113397560

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088763 CFAP44 cilia and flagella associated protein 44 protein_coding Danio_rerio
ENSMUSG00000071550 Wdr52 cilia and flagella associated protein 44 protein_coding Mus_musculus

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