C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell receptor alpha variable 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000211797 TRAV17 9606 + 14:21997539-21998168 TR_V_gene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000390445 TRAV17-001 21997539-21998168 TR_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungOvaryENST00000390445
Transcript ID Adrenal Breast Colon Heart Liver Lung Ovary
ENST00000390445 1.200±0.00 0.729±0.54 0.308±0.19 0.321±0.00 0.094±0.00 0.702±0.11 0.122±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000076770 Trav8d-1 T cell receptor alpha variable 8D-1 TR_V_gene Mus_musculus
ENSMUSG00000076831 Trav8-1 T cell receptor alpha variable 8-1 TR_V_gene Mus_musculus

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