C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SOGA family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214338 SOGA3 9606 - 6:127472794-127519191 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000465909 SOGA3-003 127472806-127518891 protein_coding
  ENST00000467753 SOGA3-002 127516584-127518920 protein_coding
  ENST00000525778 SOGA3-001 127472794-127519191 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLungOvaryPlacentaENST00000465909ENST00000467753ENST00000525778
Transcript ID Bladder Brain Kidney Lung Ovary Placenta
ENST00000465909 0.215±0.00 3.426±0.00 N/A 1.422±0.00 0.220±0.00 N/A
ENST00000467753 N/A N/A 0.908±0.00 N/A N/A N/A
ENST00000525778 N/A 4.948±0.00 N/A N/A N/A 0.111±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EL CIL_0001EL_0002 CGP 6:127438406-127519355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0010506 IEA regulation of autophagy
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063311 soga3a SOGA family member 3a protein_coding Danio_rerio
ENSDARG00000075455 soga3b SOGA family member 3b protein_coding Danio_rerio
ENSMUSG00000038916 Soga3 SOGA family member 3 protein_coding Mus_musculus

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