C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, SWIM-type containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214941 ZSWIM7 9606 - 17:15976560-15999717 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399277 ZSWIM7-001 15976560-15999692 protein_coding
  ENST00000399280 ZSWIM7-002 15976560-15999694 processed_transcript
  ENST00000460252 ZSWIM7-008 15977891-15999681 nonsense_mediated_decay
  ENST00000460315 ZSWIM7-009 15977727-15999688 nonsense_mediated_decay
  ENST00000472495 ZSWIM7-003 15977727-15999684 protein_coding
  ENST00000474716 ZSWIM7-010 15977727-15999639 nonsense_mediated_decay
  ENST00000475498 ZSWIM7-012 15977925-15993830 processed_transcript
  ENST00000476496 ZSWIM7-014 15976560-15999588 nonsense_mediated_decay
  ENST00000486655 ZSWIM7-011 15977727-15999589 protein_coding
  ENST00000486706 ZSWIM7-007 15977733-15999669 nonsense_mediated_decay
  ENST00000490395 ZSWIM7-004 15976560-15999650 nonsense_mediated_decay
  ENST00000491631 ZSWIM7-005 15977727-15999717 nonsense_mediated_decay
  ENST00000495825 ZSWIM7-013 15977730-15999683 processed_transcript
  ENST00000497434 ZSWIM7-015 15976569-15980367 processed_transcript
  ENST00000497719 ZSWIM7-006 15977012-15999713 processed_transcript
  ENST00000579955 ZSWIM7-020 15978078-15999684 nonsense_mediated_decay
  ENST00000584519 ZSWIM7-021 15977683-15999636 nonsense_mediated_decay
  ENST00000585208 ZSWIM7-016 15977733-15999634 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartMuscleOvaryPlacentaTestisENST00000399277ENST00000472495ENST00000476496ENST00000490395ENST00000495825
Transcript ID Bladder Heart Muscle Ovary Placenta Testis
ENST00000399277 N/A 0.827±0.00 N/A 5.469±0.00 N/A N/A
ENST00000472495 N/A 3.394±0.00 N/A N/A 12.771±0.00 N/A
ENST00000476496 N/A N/A N/A N/A N/A 24.157±0.00
ENST00000490395 4.279±0.00 N/A N/A N/A 12.677±0.00 N/A
ENST00000495825 N/A N/A 6.355±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XH CIL_0002XH_0001 CGP 17:15944917-15999717
CIL_0000H6 CIL_0000H6_0001 CGP 17:15976560-16045015

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0050821 IMP protein stabilization
GO:0097196 IDA Shu complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067608 zswim7 zinc finger, SWIM-type containing 7 protein_coding Danio_rerio
ENSMUSG00000014243 Zswim7 zinc finger SWIM-type containing 7 protein_coding Mus_musculus

Loading