C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000215425  |
DDX39B | 9606 | - |
CHR_HSCHR6_MHC_QBL_CTG1:31520488-31536841  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000383508 |
DDX39B-003 | 31520488-31536841 | protein_coding | ||
| ENST00000400293 |
DDX39B-006 | 31520488-31530800 | protein_coding | ||
| ENST00000400295 |
DDX39B-002 | 31520488-31532711 | protein_coding | ||
| ENST00000400296 |
DDX39B-001 | 31520488-31532711 | protein_coding | ||
| ENST00000415027 |
DDX39B-014 | 31525675-31532200 | protein_coding | ||
| ENST00000423951 |
DDX39B-012 | 31529085-31532249 | protein_coding | ||
| ENST00000425047 |
DDX39B-015 | 31529465-31532136 | protein_coding | ||
| ENST00000432466 |
DDX39B-013 | 31526877-31532252 | protein_coding | ||
| ENST00000435182 |
DDX39B-017 | 31523048-31531794 | protein_coding | ||
| ENST00000438883 |
DDX39B-011 | 31529097-31532254 | protein_coding | ||
| ENST00000442537 |
DDX39B-016 | 31526891-31531992 | protein_coding | ||
| ENST00000445602 |
DDX39B-020 | 31521047-31524779 | protein_coding | ||
| ENST00000446272 |
DDX39B-009 | 31525656-31532281 | protein_coding | ||
| ENST00000446328 |
DDX39B-019 | 31521570-31532244 | protein_coding | ||
| ENST00000449863 |
DDX39B-018 | 31525663-31531747 | protein_coding | ||
| ENST00000452414 |
DDX39B-010 | 31529148-31532266 | protein_coding | ||
| ENST00000460555 |
DDX39B-007 | 31520488-31522012 | retained_intron | ||
| ENST00000462954 |
DDX39B-005 | 31522681-31532264 | retained_intron | ||
| ENST00000465016 |
DDX39B-021 | 31521384-31521939 | retained_intron | ||
| ENST00000485534 |
DDX39B-004 | 31520488-31532280 | retained_intron | ||
| ENST00000495391 |
DDX39B-008 | 31521542-31532664 | processed_transcript | ||
| ENST00000495997 |
DDX39B-022 | 31520488-31525743 | nonsense_mediated_decay | ||
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000245 | IDA | spliceosomal complex assembly |
| GO:0000346 | IDA | transcription export complex |
| GO:0000398 | IGI | mRNA splicing, via spliceosome |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003677 | IEA | DNA binding |
| GO:0004004 | IDA | ATP-dependent RNA helicase activity |
| GO:0004386 | IEA | helicase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005524 | IEA | ATP binding |
| GO:0005634 | IDA | nucleus |
| GO:0005681 | IDA | spliceosomal complex |
| GO:0005687 | IDA | U4 snRNP |
| GO:0005688 | IDA | U6 snRNP |
| GO:0005737 | IDA | cytoplasm |
| GO:0006200 | IDA | ATP catabolic process |
| GO:0006406 | IGI | mRNA export from nucleus |
| GO:0008152 | IEA | metabolic process |
| GO:0008186 | IDA | RNA-dependent ATPase activity |
| GO:0008380 | IDA | RNA splicing |
| GO:0010501 | IDA | RNA secondary structure unwinding |
| GO:0016787 | IEA | hydrolase activity |
| GO:0017070 | IDA | U6 snRNA binding |
| GO:0030621 | IDA | U4 snRNA binding |
| GO:0032786 | IMP | positive regulation of DNA-templated transcription, elongation |
| GO:0043008 | IDA | ATP-dependent protein binding |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0046784 | IDA | viral mRNA export from host cell nucleus |
| GO:2000002 | IMP | negative regulation of DNA damage checkpoint |
Homologs | |||||
| No Homologs available. | |||||
|---|---|---|---|---|---|
