C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RPL17-C18orf32 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000215472 RPL17-C18orf32 9606 - 18:49481681-49491586 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332968 RPL17-C18orf32-003 49482152-49491586 protein_coding
  ENST00000577910 RPL17-C18orf32-002 49482176-49491586 nonsense_mediated_decay
  ENST00000584895 RPL17-C18orf32-001 49481681-49491586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000577910
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000577910 19.467±0.00 33.467±8.27 56.163±0.00 31.611±0.00 14.795±8.54 31.700±0.00 29.802±0.12 17.334±0.00 9.903±2.26 61.949±29.91 54.732±1.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA structural constituent of ribosome
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0015934 IEA large ribosomal subunit
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057556 C21H18orf32 chromosome 18 open reading frame 32 protein_coding Danio_rerio

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