C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000215529 EFCAB8 9606 + 20:32858923-32961609 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000400522 EFCAB8-001 32858923-32961609 protein_coding
  ENST00000524882 EFCAB8-006 32917060-32920219 retained_intron
  ENST00000533479 EFCAB8-005 32898385-32903670 retained_intron
  ENST00000618684 EFCAB8-201 32863793-32878811 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000400522ENST00000524882ENST00000533479ENST00000618684
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000400522 N/A 0.093±0.00 0.020±0.00 0.061±0.00 N/A 0.004±0.00 0.010±0.00 0.057±0.00 0.007±0.00 0.075±0.05 0.747±0.32
ENST00000524882 0.048±0.00 N/A 0.068±0.00 0.282±0.00 0.025±0.00 N/A 0.021±0.00 N/A N/A N/A N/A
ENST00000533479 0.111±0.00 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.452±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NQ CIL_0008NQ_0001 VISTA 20:32326689-32928341
CIL_0008QN CIL_0008QN_0001 VISTA 20:32676112-33281064

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096532 WDR64 EF-hand calcium binding domain 8 protein_coding Danio_rerio

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