C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000215641 TRIM27 9606 - CHR_HSCHR6_MHC_QBL_CTG1:28902991-28923978 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000400720 TRIM27-001 28902991-28923978 protein_coding
  ENST00000417660 TRIM27-002 28902991-28923977 protein_coding
  ENST00000430208 TRIM27-003 28902991-28908978 protein_coding
  ENST00000471067 TRIM27-005 28914765-28920172 processed_transcript
  ENST00000486244 TRIM27-007 28911296-28921965 processed_transcript
  ENST00000487609 TRIM27-006 28904463-28907573 processed_transcript
  ENST00000495323 TRIM27-004 28902992-28923902 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0002820 IMP negative regulation of adaptive immune response
GO:0003676 TAS nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004714 TAS transmembrane receptor protein tyrosine kinase activity
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005768 IDA endosome
GO:0005887 TAS integral component of plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006469 IDA negative regulation of protein kinase activity
GO:0007283 TAS spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0008283 TAS cell proliferation
GO:0016020 TAS membrane
GO:0016874 IEA ligase activity
GO:0018108 TAS peptidyl-tyrosine phosphorylation
GO:0030904 IDA retromer complex
GO:0031965 IDA nuclear membrane
GO:0032720 IMP negative regulation of tumor necrosis factor production
GO:0032897 IDA negative regulation of viral transcription
GO:0034314 IDA Arp2/3 complex-mediated actin nucleation
GO:0042147 IDA retrograde transport, endosome to Golgi
GO:0045087 IDA innate immune response
GO:0045814 IDA negative regulation of gene expression, epigenetic
GO:0046872 TAS:IEA metal ion binding
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0070206 IDA protein trimerization
GO:0070534 IMP protein K63-linked ubiquitination
GO:0072643 IMP interferon-gamma secretion
GO:0090281 IMP negative regulation of calcium ion import
GO:1900041 IMP negative regulation of interleukin-2 secretion

Homologs

No Homologs available.

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