C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000221878 PSG7 9606 - 19:42906822-43082671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000406070 PSG7-001 42924140-42937173 protein_coding
  ENST00000446844 PSG7-003 42924879-42937166 protein_coding
  ENST00000471557 PSG7-002 42936157-42937178 processed_transcript
  ENST00000599226 PSG7-004 42924132-42927577 retained_intron
  ENST00000599620 PSG7-005 42929189-42935557 retained_intron
  ENST00000617049 PSG7-201 42906822-42937174 protein_coding
  ENST00000618424 PSG7-202 42924134-43082671 protein_coding
  ENST00000623675 PSG7-006 42924332-42937098 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartPlacentaENST00000406070ENST00000446844ENST00000471557ENST00000599226
Transcript ID Adipose Brain Breast Heart Placenta
ENST00000406070 N/A N/A N/A N/A 95.151±0.00
ENST00000446844 N/A N/A 0.113±0.00 N/A N/A
ENST00000471557 0.270±0.00 N/A N/A N/A N/A
ENST00000599226 N/A 0.054±0.00 N/A 0.082±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UJ CIL_0003UJ_000I CGP 19:42721638-43205603
CIL_0003UJ CIL_0003UJ_000G CGP 19:42728080-43205603
CIL_0003UJ CIL_0003UJ_000K CGP 19:42866464-43082671
CIL_0003UJ CIL_0003UJ_000J CGP 19:42906822-43082671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041119 ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 protein_coding Danio_rerio
ENSDARG00000076981 zgc:198329 zgc:198329 protein_coding Danio_rerio
ENSDARG00000078177 cxcr3.1 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000079372 si:ch211-264f5.6 si:ch211-264f5.6 protein_coding Danio_rerio
ENSDARG00000092520 si:dkey-250k15.10 si:dkey-250k15.10 protein_coding Danio_rerio
ENSDARG00000093279 si:dkey-11o1.3 si:dkey-11o1.3 protein_coding Danio_rerio
ENSDARG00000095048 si:dkey-250k15.7 si:dkey-250k15.7 protein_coding Danio_rerio
ENSDARG00000095134 si:dkey-250k15.9 si:dkey-250k15.9 protein_coding Danio_rerio
ENSDARG00000095772 si:dkey-11o1.2 si:dkey-11o1.2 protein_coding Danio_rerio

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