C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) pseudogene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000223553 SMPD4P1 9606 - 22:20602595-20656914 transcribed_unprocessed_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000416717 SMPD4P1-001 20602595-20626134 transcribed_unprocessed_pseudogene
  ENST00000433066 SMPD4P1-003 20638361-20639135 processed_transcript
  ENST00000443839 SMPD4P1-002 20616230-20656914 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyOvaryTestisENST00000416717ENST00000443839
Transcript ID Adrenal Brain Breast Colon Kidney Ovary Testis
ENST00000416717 0.020±0.00 N/A N/A N/A N/A 0.011±0.00 0.644±0.38
ENST00000443839 N/A 0.008±0.00 0.008±0.00 0.034±0.00 0.007±0.00 0.016±0.00 0.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0001 VISTA 22:20120771-20724717

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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