C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AFG3-like AAA ATPase 1, pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000223959 AFG3L1P 9606 + 16:89972586-90002161 unitary_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355531 AFG3L1P-009 89988496-90000553 retained_intron
  ENST00000388970 AFG3L1P-008 89977694-90000553 processed_transcript
  ENST00000418696 AFG3L1P-002 89972586-89996626 processed_transcript
  ENST00000421164 AFG3L1P-005 89972648-89984699 retained_intron
  ENST00000421780 AFG3L1P-007 89977694-89984701 retained_intron
  ENST00000423684 AFG3L1P-006 89977694-89984701 retained_intron
  ENST00000423742 AFG3L1P-016 89972594-89978517 retained_intron
  ENST00000427658 AFG3L1P-010 89990332-89996610 retained_intron
  ENST00000429663 AFG3L1P-014 89972586-89981886 processed_transcript
  ENST00000431757 AFG3L1P-013 89972586-89979870 processed_transcript
  ENST00000436447 AFG3L1P-003 89972593-89996623 processed_transcript
  ENST00000437774 AFG3L1P-004 89972617-89996623 processed_transcript
  ENST00000450026 AFG3L1P-015 89972589-89977955 retained_intron
  ENST00000454997 AFG3L1P-012 89998606-90002161 retained_intron
  ENST00000457926 AFG3L1P-001 89972593-89996623 processed_transcript
  ENST00000458301 AFG3L1P-011 89980245-89996623 processed_transcript
  ENST00000557444 AFG3L1P-018 89972631-90000668 unitary_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355531ENST00000418696ENST00000421164ENST00000421780ENST00000423684ENST00000423742ENST00000427658ENST00000429663ENST00000431757ENST00000436447ENST00000437774ENST00000450026ENST00000454997ENST00000457926ENST00000458301ENST00000557444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355531 N/A N/A 0.462±0.00 N/A 0.672±0.00 1.146±0.00 N/A 0.665±0.00 N/A N/A N/A N/A N/A N/A
ENST00000418696 N/A N/A N/A N/A N/A 0.499±0.00 0.194±0.00 N/A N/A N/A 0.452±0.00 N/A N/A 1.204±0.00
ENST00000421164 0.488±0.00 2.761±0.00 N/A 0.831±0.00 0.942±0.00 0.619±0.00 N/A N/A 1.006±0.00 N/A N/A N/A N/A N/A
ENST00000421780 N/A N/A N/A 2.477±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.949±0.00
ENST00000423684 N/A N/A N/A N/A 0.896±0.00 N/A N/A N/A N/A N/A N/A 1.267±0.00 N/A N/A
ENST00000423742 N/A N/A N/A 1.007±0.00 N/A 0.806±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427658 N/A 2.782±0.00 N/A 1.197±0.00 0.600±0.37 0.338±0.00 0.322±0.00 N/A N/A N/A N/A 2.111±0.00 0.590±0.00 N/A
ENST00000429663 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000431757 N/A N/A N/A N/A N/A 1.214±0.00 N/A N/A N/A N/A 1.156±0.00 N/A N/A N/A
ENST00000436447 N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A 0.441±0.00 N/A N/A 1.519±0.00 N/A N/A
ENST00000437774 0.211±0.00 N/A N/A N/A N/A N/A 0.104±0.06 N/A 0.382±0.00 N/A N/A 1.271±0.00 0.295±0.00 N/A
ENST00000450026 N/A N/A 1.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454997 N/A N/A N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457926 0.312±0.00 N/A N/A N/A N/A N/A N/A N/A 0.526±0.00 0.778±0.25 N/A N/A N/A 3.626±0.00
ENST00000458301 N/A N/A 0.254±0.00 N/A 1.532±0.00 N/A 0.075±0.00 0.986±0.71 0.619±0.00 N/A N/A 1.159±0.78 0.524±0.24 1.878±0.00
ENST00000557444 N/A N/A N/A N/A N/A N/A N/A 1.137±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

Loading