C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000225073  |
DDX39B | 9606 | - |
CHR_HSCHR6_MHC_COX_CTG1:31517671-31534027  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000412106 |
DDX39B-003 | 31517671-31534027 | protein_coding | ||
| ENST00000414451 |
DDX39B-015 | 31526651-31529322 | protein_coding | ||
| ENST00000415036 |
DDX39B-010 | 31526334-31529452 | protein_coding | ||
| ENST00000415689 |
DDX39B-001 | 31517671-31529897 | protein_coding | ||
| ENST00000420958 |
DDX39B-018 | 31522847-31528933 | protein_coding | ||
| ENST00000422243 |
DDX39B-020 | 31518231-31521963 | protein_coding | ||
| ENST00000426189 |
DDX39B-012 | 31526271-31529435 | protein_coding | ||
| ENST00000427425 |
DDX39B-019 | 31518754-31529430 | protein_coding | ||
| ENST00000429022 |
DDX39B-011 | 31526283-31529440 | protein_coding | ||
| ENST00000438449 |
DDX39B-017 | 31520232-31528980 | protein_coding | ||
| ENST00000438578 |
DDX39B-006 | 31517671-31527986 | protein_coding | ||
| ENST00000439691 |
DDX39B-016 | 31524075-31529178 | protein_coding | ||
| ENST00000442717 |
DDX39B-013 | 31524061-31529438 | protein_coding | ||
| ENST00000451051 |
DDX39B-014 | 31522859-31529386 | protein_coding | ||
| ENST00000455645 |
DDX39B-009 | 31522840-31529467 | protein_coding | ||
| ENST00000456476 |
DDX39B-002 | 31517671-31529897 | protein_coding | ||
| ENST00000464411 |
DDX39B-022 | 31517671-31522927 | nonsense_mediated_decay | ||
| ENST00000467694 |
DDX39B-008 | 31518748-31529850 | protein_coding | ||
| ENST00000472840 |
DDX39B-007 | 31517671-31519196 | retained_intron | ||
| ENST00000482077 |
DDX39B-005 | 31519865-31529452 | retained_intron | ||
| ENST00000485571 |
DDX39B-004 | 31517671-31529466 | retained_intron | ||
| ENST00000494127 |
DDX39B-021 | 31518568-31519123 | retained_intron | ||
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000245 | IDA | spliceosomal complex assembly |
| GO:0000346 | IDA | transcription export complex |
| GO:0000398 | IGI | mRNA splicing, via spliceosome |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003677 | IEA | DNA binding |
| GO:0004004 | IDA | ATP-dependent RNA helicase activity |
| GO:0004386 | IEA | helicase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005524 | IEA | ATP binding |
| GO:0005634 | IDA | nucleus |
| GO:0005681 | IDA | spliceosomal complex |
| GO:0005687 | IDA | U4 snRNP |
| GO:0005688 | IDA | U6 snRNP |
| GO:0005737 | IDA | cytoplasm |
| GO:0006200 | IDA | ATP catabolic process |
| GO:0006406 | IGI | mRNA export from nucleus |
| GO:0008152 | IEA | metabolic process |
| GO:0008186 | IDA | RNA-dependent ATPase activity |
| GO:0008380 | IDA | RNA splicing |
| GO:0010501 | IDA | RNA secondary structure unwinding |
| GO:0016787 | IEA | hydrolase activity |
| GO:0017070 | IDA | U6 snRNA binding |
| GO:0030621 | IDA | U4 snRNA binding |
| GO:0032786 | IMP | positive regulation of DNA-templated transcription, elongation |
| GO:0043008 | IDA | ATP-dependent protein binding |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0046784 | IDA | viral mRNA export from host cell nucleus |
| GO:2000002 | IMP | negative regulation of DNA damage checkpoint |
Homologs | |||||
| No Homologs available. | |||||
|---|---|---|---|---|---|
