C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | PHD finger protein 1 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000225553  |
PHF1 | 9606 | + |
CHR_HSCHR6_MHC_SSTO_CTG1:33550562-33556643  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000419154 |
PHF1-012 | 33554708-33556241 | protein_coding | ||
| ENST00000421466 |
PHF1-005 | 33550562-33553486 | protein_coding | ||
| ENST00000423868 |
PHF1-013 | 33555255-33556604 | protein_coding | ||
| ENST00000427869 |
PHF1-002 | 33551153-33556643 | protein_coding | ||
| ENST00000447305 |
PHF1-006 | 33550943-33554023 | protein_coding | ||
| ENST00000454914 |
PHF1-001 | 33551153-33556643 | protein_coding | ||
| ENST00000465760 |
PHF1-007 | 33550950-33552971 | processed_transcript | ||
| ENST00000475137 |
PHF1-011 | 33553961-33556404 | protein_coding | ||
| ENST00000480565 |
PHF1-009 | 33554528-33556403 | retained_intron | ||
| ENST00000482971 |
PHF1-010 | 33555431-33556502 | retained_intron | ||
| ENST00000487460 |
PHF1-003 | 33551220-33556629 | processed_transcript | ||
| ENST00000495185 |
PHF1-004 | 33550882-33556061 | nonsense_mediated_decay | ||
| ENST00000496666 |
PHF1-008 | 33553176-33554136 | retained_intron | ||
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003700 | TAS | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0005856 | IEA | cytoskeleton |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0006974 | IDA | cellular response to DNA damage stimulus |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016568 | IEA | chromatin modification |
| GO:0035064 | IDA | methylated histone binding |
| GO:0035098 | IDA | ESC/E(Z) complex |
| GO:0035861 | IDA | site of double-strand break |
| GO:0061086 | IMP | negative regulation of histone H3-K27 methylation |
| GO:0061087 | IMP | positive regulation of histone H3-K27 methylation |
Homologs | |||||
| No Homologs available. | |||||
|---|---|---|---|---|---|
