C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class I, C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000225691 HLA-C 9606 - CHR_HSCHR6_MHC_MCF_CTG1:31345885-31349256 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000419135 HLA-C-003 31345885-31349212 protein_coding
  ENST00000429840 HLA-C-002 31345885-31349219 protein_coding
  ENST00000433153 HLA-C-004 31345885-31349212 protein_coding
  ENST00000445075 HLA-C-007 31347345-31349195 protein_coding
  ENST00000457903 HLA-C-001 31345885-31349256 protein_coding
  ENST00000467922 HLA-C-008 31347352-31349256 retained_intron
  ENST00000475452 HLA-C-011 31345885-31346801 retained_intron
  ENST00000479546 HLA-C-009 31347341-31349199 processed_transcript
  ENST00000481588 HLA-C-005 31345885-31349176 retained_intron
  ENST00000482006 HLA-C-012 31348230-31349216 retained_intron
  ENST00000490960 HLA-C-010 31345885-31347553 retained_intron
  ENST00000491984 HLA-C-006 31345885-31349231 nonsense_mediated_decay
  ENST00000619148 HLA-C-203 31346495-31347428 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002480 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0006955 IEA immune response
GO:0009986 IDA cell surface
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019882 IEA antigen processing and presentation
GO:0030670 TAS phagocytic vesicle membrane
GO:0031901 TAS early endosome membrane
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042605 ISS peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0045087 TAS innate immune response
GO:0046977 IDA TAP binding
GO:0050776 TAS regulation of immune response
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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