C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: testis expressed 41 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000226674 TEX41 9606 + 2:144667967-145182649 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000414195 TEX41-010 145023228-145182649 lincRNA
  ENST00000414256 TEX41-006 144668019-144890214 lincRNA
  ENST00000420472 TEX41-009 145023187-145172675 lincRNA
  ENST00000423031 TEX41-007 145023095-145072654 lincRNA
  ENST00000431734 TEX41-005 144667986-144811275 lincRNA
  ENST00000432608 TEX41-003 144667967-144768383 lincRNA
  ENST00000445791 TEX41-002 144667985-145076729 lincRNA
  ENST00000451027 TEX41-004 144667985-145044443 lincRNA
  ENST00000451478 TEX41-008 145023158-145182405 lincRNA
  ENST00000451774 TEX41-001 144668026-145074095 lincRNA
  ENST00000594471 TEX41-021 144667985-145182374 lincRNA
  ENST00000594626 TEX41-036 144766361-145182374 lincRNA
  ENST00000594837 TEX41-017 145023232-145058210 lincRNA
  ENST00000595686 TEX41-033 144667990-145182374 lincRNA
  ENST00000596034 TEX41-020 145023228-145182641 lincRNA
  ENST00000596230 TEX41-022 144667985-145182344 lincRNA
  ENST00000596278 TEX41-019 145023228-145073146 lincRNA
  ENST00000596540 TEX41-030 144667985-145172085 lincRNA
  ENST00000596589 TEX41-027 144668087-145182374 lincRNA
  ENST00000596747 TEX41-015 145023228-145152141 lincRNA
  ENST00000596970 TEX41-013 145023228-145182473 lincRNA
  ENST00000597173 TEX41-011 145023172-145152502 lincRNA
  ENST00000597469 TEX41-034 144667985-145182374 lincRNA
  ENST00000597655 TEX41-031 144667967-145172078 lincRNA
  ENST00000597670 TEX41-037 144668012-145182374 lincRNA
  ENST00000597893 TEX41-028 144668087-145182374 lincRNA
  ENST00000598248 TEX41-025 144667985-145182374 lincRNA
  ENST00000598659 TEX41-029 144667967-145182374 lincRNA
  ENST00000599072 TEX41-023 144668057-145182374 lincRNA
  ENST00000599187 TEX41-035 144668020-145182374 lincRNA
  ENST00000599358 TEX41-018 145023228-145043945 lincRNA
  ENST00000600064 TEX41-032 144668012-145182374 lincRNA
  ENST00000600679 TEX41-024 144667978-145182374 lincRNA
  ENST00000601277 TEX41-026 144667978-145182374 lincRNA
  ENST00000601578 TEX41-016 145023228-145182617 lincRNA
  ENST00000602041 TEX41-014 145023228-145182564 lincRNA
  ENST00000602108 TEX41-012 145023172-145182641 lincRNA
  ENST00000604253 TEX41-038 145171998-145182509 lincRNA
  ENST00000605238 TEX41-039 145171998-145182515 lincRNA
  ENST00000608432 TEX41-040 145023228-145182463 lincRNA
  ENST00000608652 TEX41-042 145023228-145182374 lincRNA
  ENST00000609705 TEX41-041 145023228-145182424 lincRNA
  ENST00000614173 TEX41-043 144896566-144903783 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414195ENST00000420472ENST00000431734ENST00000445791ENST00000451027ENST00000451478ENST00000451774ENST00000594837ENST00000596034ENST00000596278ENST00000596747ENST00000596970ENST00000597173ENST00000602041ENST00000604253ENST00000608432
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A
ENST00000420472 N/A N/A 2.282±0.00 N/A N/A 0.220±0.00 N/A 0.091±0.00 N/A 0.417±0.00 N/A 0.297±0.00 0.050±0.00 N/A
ENST00000431734 N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000445791 N/A N/A 0.226±0.00 N/A N/A 0.035±0.00 0.007±0.00 N/A 0.013±0.00 0.064±0.00 N/A 0.066±0.00 0.018±0.00 0.406±0.07
ENST00000451027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 3.802±0.00
ENST00000451478 N/A N/A N/A N/A N/A N/A N/A 1.061±0.00 0.329±0.00 0.307±0.00 N/A N/A N/A N/A
ENST00000451774 N/A 0.093±0.00 N/A N/A N/A 0.072±0.00 N/A 0.062±0.00 0.015±0.00 0.037±0.00 0.056±0.00 N/A 0.018±0.00 0.669±0.20
ENST00000594837 N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000596034 0.097±0.00 N/A N/A N/A 0.267±0.00 N/A N/A 0.279±0.00 N/A N/A 0.349±0.00 N/A N/A 1.820±0.00
ENST00000596278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.886±0.00
ENST00000596747 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.390±0.00 N/A 0.141±0.11 N/A N/A
ENST00000596970 N/A N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A 0.179±0.00 N/A N/A N/A
ENST00000597173 0.121±0.00 0.295±0.00 N/A 0.134±0.00 N/A 0.166±0.00 0.057±0.00 0.307±0.00 0.036±0.00 N/A N/A 0.369±0.19 N/A N/A
ENST00000602041 N/A 0.398±0.00 N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604253 N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000608432 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A 0.121±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L9 CIL_0007L9_0003 UCNEbase 2:143915206-145198080
CIL_0008S1 CIL_0008S1_0001 VISTA 2:144130532-144732245
CIL_0008RV CIL_0008RV_0001 VISTA 2:144143079-144743846
CIL_000944 CIL_000944_0001 VISTA 2:144209700-144811716
CIL_0008FM CIL_0008FM_0001 VISTA 2:144282035-144883963
CIL_0007GY CIL_0007GY_0001 CGP 2:144388001-147930826

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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