C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoid X receptor, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000227322 RXRB 9606 - CHR_HSCHR6_MHC_COX_CTG1:33115214-33122477 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000436753 RXRB-001 33115214-33122312 protein_coding
  ENST00000437617 RXRB-005 33116675-33118064 protein_coding
  ENST00000443603 RXRB-002 33115214-33122238 protein_coding
  ENST00000463338 RXRB-004 33115846-33122261 nonsense_mediated_decay
  ENST00000467727 RXRB-003 33117411-33120261 retained_intron
  ENST00000473482 RXRB-006 33116290-33116986 retained_intron
  ENST00000528918 RXRB-008 33117237-33122286 retained_intron
  ENST00000531100 RXRB-007 33116196-33122477 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 NAS:IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0003713 TAS transcription coactivator activity
GO:0004879 IDA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

No Homologs available.

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