C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | synaptic Ras GTPase activating protein 1 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000227460  |
SYNGAP1 | 9606 | + |
CHR_HSCHR6_MHC_SSTO_CTG1:33560260-33593877  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000355818 |
SYNGAP1-006 | 33581376-33584654 | protein_coding | ||
| ENST00000395071 |
SYNGAP1-004 | 33560455-33592583 | protein_coding | ||
| ENST00000414753 |
SYNGAP1-003 | 33571921-33592398 | protein_coding | ||
| ENST00000455687 |
SYNGAP1-001 | 33560354-33593877 | protein_coding | ||
| ENST00000461459 |
SYNGAP1-002 | 33560260-33579299 | processed_transcript | ||
| ENST00000481000 |
SYNGAP1-008 | 33586899-33588348 | retained_intron | ||
| ENST00000484671 |
SYNGAP1-007 | 33586852-33589241 | processed_transcript | ||
| ENST00000490978 |
SYNGAP1-005 | 33578662-33580765 | processed_transcript | ||
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005099 | IBA | Ras GTPase activator activity |
| GO:0005515 | IEA | protein binding |
| GO:0005622 | IEA | intracellular |
| GO:0005737 | IBA | cytoplasm |
| GO:0007165 | IEA | signal transduction |
| GO:0017124 | IEA | SH3 domain binding |
| GO:0031235 | IBA | intrinsic component of the cytoplasmic side of the plasma membrane |
| GO:0032318 | IEA | regulation of Ras GTPase activity |
| GO:0032320 | IBA | positive regulation of Ras GTPase activity |
| GO:0046580 | ISS | negative regulation of Ras protein signal transduction |
| GO:0048167 | ISS | regulation of synaptic plasticity |
Homologs | |||||
| No Homologs available. | |||||
|---|---|---|---|---|---|
