C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000228430 RP11-15B24.5 9606 + 9:82272756-82564432 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000457558 RP11-15B24.5-001 82273407-82428287 lincRNA
  ENST00000585454 RP11-15B24.5-013 82273459-82453803 lincRNA
  ENST00000585511 RP11-15B24.5-006 82277049-82428480 lincRNA
  ENST00000585998 RP11-15B24.5-002 82272756-82277127 lincRNA
  ENST00000586214 RP11-15B24.5-009 82273459-82453443 lincRNA
  ENST00000586399 RP11-15B24.5-015 82277049-82520940 lincRNA
  ENST00000588368 RP11-15B24.5-005 82273460-82449785 lincRNA
  ENST00000588492 RP11-15B24.5-012 82273459-82453803 lincRNA
  ENST00000589973 RP11-15B24.5-016 82491952-82564432 lincRNA
  ENST00000590250 RP11-15B24.5-004 82273459-82453729 lincRNA
  ENST00000590298 RP11-15B24.5-010 82273459-82564141 lincRNA
  ENST00000590667 RP11-15B24.5-007 82273459-82451723 lincRNA
  ENST00000590791 RP11-15B24.5-003 82277049-82524655 lincRNA
  ENST00000590903 RP11-15B24.5-008 82273459-82453803 lincRNA
  ENST00000591117 RP11-15B24.5-011 82273459-82453999 lincRNA
  ENST00000591257 RP11-15B24.5-014 82273459-82536232 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyOvaryTestisENST00000457558ENST00000585998ENST00000588492ENST00000589973ENST00000590791
Transcript ID Adrenal Brain Breast Colon Heart Kidney Ovary Testis
ENST00000457558 N/A 0.361±0.00 N/A N/A N/A N/A N/A N/A
ENST00000585998 N/A 0.087±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588492 N/A N/A N/A N/A N/A N/A N/A 0.179±0.00
ENST00000589973 0.022±0.00 N/A 0.350±0.26 0.088±0.00 0.040±0.00 0.213±0.00 0.056±0.00 N/A
ENST00000590791 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KE CIL_0007KE_0002 UCNEbase 9:79125686-82895571
CIL_0008ZK CIL_0008ZK_0001 VISTA 9:82031978-82633121
CIL_0008OT CIL_0008OT_0001 VISTA 9:82063359-82664216

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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