C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HLA complex group 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000228789 HCG22 9606 + 6:31053450-31059890 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000426185 HCG22-001 31054207-31059876 lincRNA
  ENST00000562344 HCG22-004 31053500-31056474 lincRNA
  ENST00000565192 HCG22-002 31053450-31059890 lincRNA
  ENST00000566475 HCG22-005 31054207-31059657 lincRNA
  ENST00000570223 HCG22-003 31054202-31056001 lincRNA
  ENST00000615046 HCG22-203 31054072-31059876 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000426185ENST00000562344ENST00000565192ENST00000566475ENST00000570223ENST00000615046
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000426185 N/A 0.069±0.03 N/A 0.026±0.00 N/A N/A N/A 0.032±0.00 N/A N/A
ENST00000562344 N/A 0.038±0.00 0.049±0.00 0.098±0.00 N/A N/A 0.352±0.00 0.074±0.00 0.048±0.00 0.021±0.01
ENST00000565192 0.620±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566475 N/A 0.313±0.07 0.180±0.00 N/A 0.051±0.00 0.072±0.00 N/A N/A N/A N/A
ENST00000570223 N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000615046 N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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