C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SATB1 antisense RNA 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000228956 SATB1-AS1 9606 + 3:18445024-18917692 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000414198 SATB1-AS1-001 18445024-18526508 antisense
  ENST00000425799 SATB1-AS1-022 18693887-18917692 antisense
  ENST00000438418 SATB1-AS1-002 18462811-18466009 retained_intron
  ENST00000453361 SATB1-AS1-021 18745744-18747491 antisense
  ENST00000456253 SATB1-AS1-005 18465983-18585762 antisense
  ENST00000593444 SATB1-AS1-008 18465992-18530154 antisense
  ENST00000593741 SATB1-AS1-003 18464330-18530394 antisense
  ENST00000595250 SATB1-AS1-010 18465983-18585762 antisense
  ENST00000595388 SATB1-AS1-020 18465983-18764059 antisense
  ENST00000595865 SATB1-AS1-009 18465983-18591770 antisense
  ENST00000596139 SATB1-AS1-016 18527172-18607187 antisense
  ENST00000596152 SATB1-AS1-019 18526396-18625427 antisense
  ENST00000596277 SATB1-AS1-012 18465983-18534762 antisense
  ENST00000596307 SATB1-AS1-013 18465983-18591737 antisense
  ENST00000596850 SATB1-AS1-018 18465983-18530049 antisense
  ENST00000598149 SATB1-AS1-004 18445237-18469702 antisense
  ENST00000598390 SATB1-AS1-014 18465983-18591984 antisense
  ENST00000598498 SATB1-AS1-007 18465983-18534897 antisense
  ENST00000598688 SATB1-AS1-006 18465983-18535024 antisense
  ENST00000598740 SATB1-AS1-011 18465983-18527638 antisense
  ENST00000599762 SATB1-AS1-015 18465983-18604241 antisense
  ENST00000600177 SATB1-AS1-017 18527172-18607184 antisense
  ENST00000609327 SATB1-AS1-024 18463662-18466009 retained_intron
  ENST00000610002 SATB1-AS1-023 18462811-18466004 retained_intron
  ENST00000616514 SATB1-AS1-025 18525791-18527231 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414198ENST00000425799ENST00000438418ENST00000593444ENST00000593741ENST00000595250ENST00000596277ENST00000596307ENST00000596850ENST00000598149ENST00000598390ENST00000598498ENST00000599762ENST00000609327ENST00000616514
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414198 N/A N/A N/A N/A 1.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.121±0.00
ENST00000425799 N/A N/A N/A N/A N/A N/A 1.204±0.00 N/A N/A N/A 0.107±0.02 N/A 0.099±0.03
ENST00000438418 N/A N/A 0.157±0.00 0.096±0.07 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.032±0.00
ENST00000593444 N/A N/A N/A N/A 1.006±0.00 N/A N/A 0.029±0.00 N/A N/A N/A 0.159±0.00 N/A
ENST00000593741 0.454±0.00 0.155±0.00 N/A 0.213±0.17 N/A N/A N/A 0.619±0.00 0.585±0.06 N/A 0.036±0.00 0.051±0.00 0.038±0.00
ENST00000595250 N/A N/A N/A N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A
ENST00000596307 0.587±0.00 N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00
ENST00000598149 N/A N/A 0.250±0.00 0.155±0.09 1.304±0.00 0.012±0.00 0.435±0.00 N/A 0.917±0.00 N/A N/A N/A 0.103±0.00
ENST00000598390 N/A N/A 1.412±1.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598498 N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.024±0.00 0.089±0.00 0.099±0.00
ENST00000599762 N/A N/A 1.347±1.05 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A
ENST00000609327 N/A N/A N/A N/A 0.388±0.00 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000616514 N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.113±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HQ CIL_0004HQ_0001 CGP 3:17157162-18445588
CIL_0007OK CIL_0007OK_0001 UCNEbase 3:17286171-18992888
CIL_0004HR CIL_0004HR_0001 CGP 3:18345387-19535646

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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