C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heat shock factor binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000230989 HSBP1 9606 + 16:83807843-83819737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000433866 HSBP1-001 83807843-83819737 protein_coding
  ENST00000567382 HSBP1-003 83808062-83811503 nonsense_mediated_decay
  ENST00000569301 HSBP1-004 83809122-83811667 retained_intron
  ENST00000570259 HSBP1-002 83807989-83818484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000433866ENST00000567382ENST00000569301ENST00000570259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000433866 1.915±0.00 4.075±0.00 0.676±0.00 3.296±1.31 1.395±0.90 2.105±1.56 1.120±0.86 4.214±3.54 1.051±0.61 2.186±1.42 0.675±0.42 3.332±2.15 4.167±0.61 3.002±0.79
ENST00000567382 N/A N/A N/A N/A N/A N/A 18.828±0.00 N/A 10.166±0.00 37.010±0.00 10.374±0.00 23.645±0.00 19.082±0.00 40.284±0.00
ENST00000569301 28.993±0.00 31.061±0.00 19.311±0.00 53.524±6.35 24.023±2.43 32.442±9.69 31.322±11.35 50.414±20.57 21.514±1.47 34.882±16.73 18.852±1.71 40.727±20.28 43.642±15.65 60.431±37.15
ENST00000570259 8.107±0.00 N/A 2.592±0.00 9.950±1.15 5.381±0.73 9.973±5.84 5.125±3.55 3.667±0.00 4.456±0.00 5.356±0.00 2.570±1.13 10.262±5.12 14.181±3.59 29.312±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JS CIL_0005JS_0001 CGP 16:82626803-83819737
CIL_0004N7 CIL_0004N7_0001 CGP 16:83807843-83927026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003714 TAS transcription corepressor activity
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0006936 IEA muscle contraction
GO:0035987 IEA endodermal cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075984 HSBP1 heat shock factor binding protein 1 protein_coding Danio_rerio
ENSMUSG00000031839 Hsbp1 heat shock factor binding protein 1 protein_coding Mus_musculus

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