C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class II, DQ beta 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000231286 HLA-DQB1 9606 - CHR_HSCHR6_MHC_MCF_CTG1:32690241-32699289 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399065 HLA-DQB1-002 32690241-32697718 protein_coding
  ENST00000399088 HLA-DQB1-001 32690241-32697596 protein_coding
  ENST00000413089 HLA-DQB1-003 32690241-32699289 protein_coding
  ENST00000424530 HLA-DQB1-004 32690241-32697550 protein_coding
  ENST00000433936 HLA-DQB1-007 32690241-32697554 protein_coding
  ENST00000457445 HLA-DQB1-006 32692807-32697559 protein_coding
  ENST00000472708 HLA-DQB1-005 32690241-32697540 retained_intron
  ENST00000476430 HLA-DQB1-009 32690660-32691214 processed_transcript
  ENST00000480749 HLA-DQB1-008 32690241-32697540 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0002381 IDA immunoglobulin production involved in immunoglobulin mediated immune response
GO:0002455 IDA humoral immune response mediated by circulating immunoglobulin
GO:0005515 IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005768 IEA endosome
GO:0005886 TAS plasma membrane
GO:0006955 IEA immune response
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IEA membrane
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019882 IEA antigen processing and presentation
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030658 TAS transport vesicle membrane
GO:0030666 TAS endocytic vesicle membrane
GO:0030669 TAS clathrin-coated endocytic vesicle membrane
GO:0031295 TAS T cell costimulation
GO:0032395 NAS MHC class II receptor activity
GO:0032588 TAS trans-Golgi network membrane
GO:0042605 ISS peptide antigen binding
GO:0042613 IEA MHC class II protein complex
GO:0050852 TAS T cell receptor signaling pathway
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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